| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5049 |
|---|
| Symbol | |
|---|
| ID | 3683530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 6340806 |
|---|
| End bp | 6341456 |
|---|
| Gene Length | 651 bp |
|---|
| Protein Length | 216 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637720409 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_325541 |
|---|
| Protein GI | 75911245 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.567517 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGACACACC ATACTAAAGA TAAAGGTGAT CTTGCTGCCG CTAAAGTCAT AGCAGATTTA
GTCGAGAAGG AATACTCCAT TTTTGTACCA GTAGTCACTG AACACGCTCC TTTTGACTTT
ATTGCTTACA AAGATGGAAA ATTTTATCGA ATCCAAGCCA AATATTCAGC TAATAATTTT
GTCAGCAATA AAAGCACTTG GGCTGACAGA AACGGGAACC ATCAAAAGAA GTACAAACCC
GACGATTTTG ACTTTTATGG TATCTACCTA CCAGCTATAG ACAAAATAGT ATACCCATCA
ATTAAGTTTG GTGGTTGCTG CATCAGAACA ACACCCCCTA AATCAGCCAG TCCTTTCTAC
TGGTGGGAAG ATTTCACAGA CTTTACTGAA GAAGCGCCTA AGCGAACCTG TAAGGAGTTT
GGCGTTGATT TGACCACTAG GAAGGTGAAT TTGGAAGCCA GAGTTCTTAC GAGAAAAGTT
GTCAGGCCGT CTAAGGAAGA ATTAGAAAAG TTGGTGTGGG AAAAGCCAAC AGCGCAAATC
GGTAAAGATT TTGGTGTGTC AGATAAATCT GTGGAAAAGT GGTGTAAGGC TTACGGGATA
GACAAGCCGC CCAGAGGATA TTGGGCGAAG CAGGGGAGGG CTGTTGACTA A
|
|---|
| Protein sequence | MTHHTKDKGD LAAAKVIADL VEKEYSIFVP VVTEHAPFDF IAYKDGKFYR IQAKYSANNF
VSNKSTWADR NGNHQKKYKP DDFDFYGIYL PAIDKIVYPS IKFGGCCIRT TPPKSASPFY
WWEDFTDFTE EAPKRTCKEF GVDLTTRKVN LEARVLTRKV VRPSKEELEK LVWEKPTAQI
GKDFGVSDKS VEKWCKAYGI DKPPRGYWAK QGRAVD
|
|---|
| |