Gene Ava_5017 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_5017 
Symbol 
ID3679030 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6305702 
End bp6306421 
Gene Length720 bp 
Protein Length239 aa 
Translation table11 
GC content43% 
IMG OID637720377 
ProductSerine O-acetyltransferase 
Protein accessionYP_325509 
Protein GI75911213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1045] Serine acetyltransferase 
TIGRFAM ID[TIGR01172] serine O-acetyltransferase 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000123081 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.163334 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTTAA CTGACTTACG CACAATTTAT GAACGCGATC CCGCAGCCCG TAATTGGCTA 
GAAATTTTAT TTTGTTATCC TGGCCTTCAA GCCTTGATGT TTCATCGCCT TACCCATTGG
TTGTATAAGA TTGGAATTCC CTTATTTCCA CGATTGATTT CGAGTATCAG TCGATTTTTG
ACAGGAATTG AAATTCACCC TGGTGCAAAG ATTGGTAAAG GCGTATTTAT TGACCACGGT
ATGGGTGTAG TTATTGGTGA AACCGCCATT GTTGGTGATT ATGCACTGAT TTATCAAGGT
GTTACCCTTG GCGGCACAGG AAAGGAAAGC GGTAAGCGTC ATCCTACATT GGGTGAGAAT
GTAGTTGTAG GAGCGGGTGC AAAAGTATTA GGTAATATTC ACATTGGTAA CAACGTTCGT
ATTGGTGCAG GTTCAGTAGT TTTGCGCGAT GTTCCCAGCA ATACGACAGT CGTAGGCGTT
CCAGGGCGTT TGATTCGGGT TGATCAAGCT CATGTTTTAG CCCATGGAAA AGTCCGTGAT
ATGGAAGCAG AGGCTATCCG CGCCCTCTTT GAACGTGTGA AGGATTTAGA ACAGCAGGTA
GAACAGTTAG GAGGTAATTT TCATGTATCC ATCAACCAGG TGGACAATCA ACACCTCCAA
GAGACTAAAG CTGAGAGTAA TTTAGTCATT GAAGAGTTTT TGGATGGTGC AGGAATTTAA
 
Protein sequence
MLLTDLRTIY ERDPAARNWL EILFCYPGLQ ALMFHRLTHW LYKIGIPLFP RLISSISRFL 
TGIEIHPGAK IGKGVFIDHG MGVVIGETAI VGDYALIYQG VTLGGTGKES GKRHPTLGEN
VVVGAGAKVL GNIHIGNNVR IGAGSVVLRD VPSNTTVVGV PGRLIRVDQA HVLAHGKVRD
MEAEAIRALF ERVKDLEQQV EQLGGNFHVS INQVDNQHLQ ETKAESNLVI EEFLDGAGI