| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_5003 |
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| Symbol | |
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| ID | 3679055 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 6288550 |
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| End bp | 6289593 |
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| Gene Length | 1044 bp |
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| Protein Length | 347 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637720363 |
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| Product | ABC transporter, substrate-binding protein, aliphatic sulphonates |
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| Protein accession | YP_325495 |
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| Protein GI | 75911199 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00833657 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.452376 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATAC CATTTCTTGA TCAACGGCGT AAATTCTTTA AACAGCTTGT ACAATATTCA
GCATTAGGAT TATTTACTTT CTCAACACCC CTAGTAGGTA GCTTATTACA GAGTACTCAA
GCCCAAACCC AACGAGGATT TGTTGCCAAA GAAATCAACT TAGCTTATCA AACTTCTGGT
GATATTGTTA AAGTCCGAAA AGTTGTAGAG CCACGGTTTA AAGCTTTGGG TATCAAAGTG
AATTGGGTAG GGCCATTCCC AGCCGGGCCG CAATTGATAG AAGCAATGAA CGCAGGTAGA
GTTGATATTG GTACTGTGGG AGAAACACCG CCAATATTTT CCCAAGCCGC AGGCATCACA
GAAGTTATCT ACATTGCTGG ACGCACTCCT AGTCGGGGTC AAAACCAAGG TGTTGTAGTC
AGAGCTGATT CTCCGATTAA AAAATTAGCT GATATTAAAG GGAAAAAAGT TGCTTTTCAG
AGGGGATCAA ATGCACATTA TTTACTAGCA AAAGCTTTAC AAGAAGTGGG CTTAAAAATT
AGTGATGTGC AAATTGTTGG TTTAACTCCA TCAGAAGCTC GTGATGCTTT CATTCAAAAC
AAAGTGGATG TTTGGGTAGC TAGTGACCCA TTCTTAGCTC TGGTGGAAAA AATTATTCCG
ATTCGCAATT TGAGGAATGC AGCCAAAATT AACACATTGG GTGGATTTTA CCTGGGTAGA
CGTAGATTTG TCACTCAAAA TCCTGAATTG GTAAGGGTGT TTTTAGAAGA AGCAGACAAG
GTAGGCGAAT GGGCAGAAAA AAATCCCACT GAAGTTGCTA AGGCTTTTGC ACCGGAACTG
AAATTGGAAG TATCAGTTTT AGAAAAGGTA GCACGCCGAC GTACTTATCG CTTAAGAAGA
CTCTCACCTG CGATTATTGC TGAACAACAA CGGGTAGCTG ATTTTTACTT TCAAGAAAAA
ATAATTCCCC GCAAAATAAA CATTCAGGAT GCACTACTAC CGCCACAATT ATCGGCAGCA
ATTACACCCA AGCGTCTGAA ATGA
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| Protein sequence | MKIPFLDQRR KFFKQLVQYS ALGLFTFSTP LVGSLLQSTQ AQTQRGFVAK EINLAYQTSG
DIVKVRKVVE PRFKALGIKV NWVGPFPAGP QLIEAMNAGR VDIGTVGETP PIFSQAAGIT
EVIYIAGRTP SRGQNQGVVV RADSPIKKLA DIKGKKVAFQ RGSNAHYLLA KALQEVGLKI
SDVQIVGLTP SEARDAFIQN KVDVWVASDP FLALVEKIIP IRNLRNAAKI NTLGGFYLGR
RRFVTQNPEL VRVFLEEADK VGEWAEKNPT EVAKAFAPEL KLEVSVLEKV ARRRTYRLRR
LSPAIIAEQQ RVADFYFQEK IIPRKINIQD ALLPPQLSAA ITPKRLK
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