Gene Ava_4960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4960 
Symbol 
ID3679069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6238439 
End bp6239146 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content48% 
IMG OID637720318 
Producthypothetical protein 
Protein accessionYP_325452 
Protein GI75911156 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTAA TTGTCGCCAG TCGCCACGAT AAAGCCGCCG AGGCACTGGC TCTTCGTTGG 
ATGGCTTATG ATGCCAAACT GTTAACAGTT GAAGATTTTT CGGTAGCGGG ATGGCGACAT
TACTTAGATT CTCCCCTTGA TTCTACAGCT GTAATTGGTG GGCAGGCGAT CGCAGTTGCC
AAAATTACTG GCGTTCTCAC CCGCCTACCT TACCTTCCTG AACAGGAATT ACTGCACATT
GCCCCAGAAG ACCGCGCCTA TGTGGCAGCA GAAATGAATG CTTTCCTCGT TTCTTGGTTA
TCTGGGTTAC CATGTCCCGT TTTAAATCGA CCAACGCCAA CATATTTACT AGGGCCTAAT
TGGCGACCAC AGCAATGGGC TTATGCAGCC GCTCAAATTG GTATACCTGT GCGTCCGGTC
AGACGACAAG TGACATTATC TGCGCCTATC CAGGCTCAAG TTTTAGAAAA ACCACCTGTA
ACTGTGACCG TTGTGGGTCA TCGTTGTCTT GGCCAGGTAG ATGATAACCT GGCGAATCAT
GCCAAACGCC TCGCTTGTGC GGCGAAGGTT GACCTGTTGA CAGTGCAGTT TAGCAGCAGT
GAAGCTAACG CAGAGTTTTT AAATGCTGAG TTGTGGGCTG ATATTTCTCA CCCAGAAATA
TGTGATGCCA TTTTGGAACA TTTGAGTGGA GGGGATGGCA AATGTTGA
 
Protein sequence
MIVIVASRHD KAAEALALRW MAYDAKLLTV EDFSVAGWRH YLDSPLDSTA VIGGQAIAVA 
KITGVLTRLP YLPEQELLHI APEDRAYVAA EMNAFLVSWL SGLPCPVLNR PTPTYLLGPN
WRPQQWAYAA AQIGIPVRPV RRQVTLSAPI QAQVLEKPPV TVTVVGHRCL GQVDDNLANH
AKRLACAAKV DLLTVQFSSS EANAEFLNAE LWADISHPEI CDAILEHLSG GDGKC