Gene Ava_4950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4950 
Symbol 
ID3679059 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6227460 
End bp6228002 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content43% 
IMG OID637720308 
Producthypothetical protein 
Protein accessionYP_325442 
Protein GI75911146 
COG category[S] Function unknown 
COG ID[COG4719] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.483082 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGGTG TTCTTATCGC TGGTGTGGGT GCATTTGCGC TGATTGCTAC CGCACCATTT 
ATCGATCACT TACCAGGAAG TGTAGTTGCT CAAAGTATTA AAAATCAACC ACAGTTGCAA
TTGCGCTTAG GGGCGGAAAA ACAGGTTATT AGCAAGGATC AGCAGGGGAA ACAGAAGGTT
GCTTGGCAAG CATTACAAGG TCAAGCTGTA GTACAGCCTG GAGATGTGCT GCGTTATACC
TTAAATGGCG AAAATAAAAG CGATCGCTCA ATCAAAAATT TGACTCTCAA CCAACCGATT
CCCAAAGGCA TGGTATATGT GCTGAAATCA GTTGATATTT CCAATACAGA AGCCAAAATT
ACTTACAGCA TTGATGGCGG TCGCAGTTTT GTTGAGAACC CCACAGTTAA AGTTATCCTC
CCTGGCGGTA AAGCTGAAAT TAAACCAGCT CCAGCTACTG CTTATACAAA CATTCGTTTG
CAACTGCCAT TAGTAGCAGC TAAAACTACG GTTAAGGCGA CCTATTTAAC CCAGGTGCGT
TAA
 
Protein sequence
MKGVLIAGVG AFALIATAPF IDHLPGSVVA QSIKNQPQLQ LRLGAEKQVI SKDQQGKQKV 
AWQALQGQAV VQPGDVLRYT LNGENKSDRS IKNLTLNQPI PKGMVYVLKS VDISNTEAKI
TYSIDGGRSF VENPTVKVIL PGGKAEIKPA PATAYTNIRL QLPLVAAKTT VKATYLTQVR