Gene Ava_4927 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4927 
Symbol 
ID3679153 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6195988 
End bp6196869 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content37% 
IMG OID637720285 
ProductUDP-glucose pyrophosphorylase 
Protein accessionYP_325419 
Protein GI75911123 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1210] UDP-glucose pyrophosphorylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones38 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.241232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTC ATAAAGTAAG AAAAGCCGTG ATTCCGGCTG CTGGTTTTGG TACTAGATTA 
TTTCCAGCTA CTAAAGTTGT GAAAAAAGAA CTATTCCCAA TTATTGATCA AGATGGTAGA
GCAAAGCCTG TAATTTTAGC CATTGTGGAA GAAGCTATTA ATGCAGGAAT CACAGAAATT
GGTATTGTTG TACAGCCTGA TGATATAGGA GTTTTTGCTG ATTTATTTAA AAATCCACCC
GCGCCAGAAC TTTTACAGAA ACTTTCGCCA CACAATCAAG AATATAGTCA ATACTTGCAA
GAGTTGGGAC AGAAAGTTGT TTTGTTGACA CAATCAGAAC AAGAAGGTTA TGGCCACGCA
GTGTTTTGTG CCAAAGATTG GGTAGGGAAT GAACCGTTTT TATTAATGTT GGGTGATCAT
GTTTATAAAT CCGACATAAA AAAAACTTGC GCGCAACAAG TTGTAGAGAT TTACGCACAA
GTTCATCAAA GTGTTGTTGG CTTAACTACT ATGCCAGCAG CGATAATTAA CAAAGCTGGA
TGTGTTACAG GATTGTGGCA AGAGTTTAAT TCCATTTTGG AACTAACGCA ACTTGCAGAA
AAACCCAGTA TTGATTATGC GCGTGAGCAT TTGCGGGTAG AATATATGGC AGAAGATGAG
TTTTTATGTG TTTTTGGTTT GTATGTCCTC ACACCAAAAA TCTTTGATTT TCTAGAAGAA
AGTATAAACC AAAATTTACG CGATCGCGGT GAATTTCAAT TAACAACTTG TTTAGATAAA
TTGTGTCAAG CAGAAGGGAT GACAGGATAT GTGATGCAAG GGCAATGTTT TGATACGGGG
CTACCAAATA CTTATCGCCA GACATTGATT GATTTTATAT AG
 
Protein sequence
MQIHKVRKAV IPAAGFGTRL FPATKVVKKE LFPIIDQDGR AKPVILAIVE EAINAGITEI 
GIVVQPDDIG VFADLFKNPP APELLQKLSP HNQEYSQYLQ ELGQKVVLLT QSEQEGYGHA
VFCAKDWVGN EPFLLMLGDH VYKSDIKKTC AQQVVEIYAQ VHQSVVGLTT MPAAIINKAG
CVTGLWQEFN SILELTQLAE KPSIDYAREH LRVEYMAEDE FLCVFGLYVL TPKIFDFLEE
SINQNLRDRG EFQLTTCLDK LCQAEGMTGY VMQGQCFDTG LPNTYRQTLI DFI