Gene Ava_4918 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4918 
Symbol 
ID3679144 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6186772 
End bp6187422 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content46% 
IMG OID637720276 
Productbifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphatase protein 
Protein accessionYP_325410 
Protein GI75911114 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0139] Phosphoribosyl-AMP cyclohydrolase
[COG0140] Phosphoribosyl-ATP pyrophosphohydrolase 
TIGRFAM ID[TIGR03188] phosphoribosyl-ATP pyrophosphohydrolase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0834441 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCTTCA TCGATTCACA CTCACCACAA AATGTTGTCC CCGTCGAAGA AATCCGCTAC 
GATGAACGGG GTTTAGTGCC AGCAATTGTG CAAGATTATT TGGATGGCAC AGTCCTCATG
ATGGCGTGGA TGAATCGAGA GTCTTTACAA AAGACTTTAG ATACAGGGGA AACTTGGTTT
TGGAGTCGTT CCCGACAGGA ATTATGGCAT AAGGGCGGAA CTTCTGGCCA TACCCAAAAG
GTACAAAGTA TACGTTATGA CTGTGACAGT GATGCGCTGC TAGTTGGGGT GGAGCAAATT
GGAGATATTG CTTGCCATAC TGGTGAACGT AGTTGCTTCC ATCAGGTGGA AGGGAAAATC
GTGGCCCCGC CAGGGGATAC GTTATCTCAG GTATTTCAGG TAATTTGCGA TCGCCAAAAT
CACCCCAGCG AAAGTTCCTA TACCAGCAAG TTATTTGCAG GCGGCGATAA TAAGATTTTA
AAGAAGATTG GTGAGGAATC GGCTGAAGTA GTGATGGCTT GTAAGGATGA TGACCAAGAG
GCGATCGCTG GTGAGGTGGC AGATTTGCTA TACCACACTT TGGTGGCTTT AGCTCACCAT
CAAGTAGATA TCAAGGCAGT TTATCGGAAG TTACAAGAAC GTAGGCGTTA G
 
Protein sequence
MSFIDSHSPQ NVVPVEEIRY DERGLVPAIV QDYLDGTVLM MAWMNRESLQ KTLDTGETWF 
WSRSRQELWH KGGTSGHTQK VQSIRYDCDS DALLVGVEQI GDIACHTGER SCFHQVEGKI
VAPPGDTLSQ VFQVICDRQN HPSESSYTSK LFAGGDNKIL KKIGEESAEV VMACKDDDQE
AIAGEVADLL YHTLVALAHH QVDIKAVYRK LQERRR