Gene Ava_4898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4898 
Symbol 
ID3679183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp6166853 
End bp6167644 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content38% 
IMG OID637720256 
ProductABC transporter-like 
Protein accessionYP_325390 
Protein GI75911094 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.0902014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0112209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTCTAG AAACGCAAAA CTTAACAGGT GGATATACAG CAAAAACTGT AGTTAAGAAC 
ATCTCCTTAG CAATTGAAAA AGGTGAGTGG TTGAGTTTAG TAGGTGCGAA TGGTTCTGGT
AAATCTACCC TACTCAAACT CATGAGTCGT TTGTTAATTC CCCAAACAGG AATAGTATTA
TTAGATGGGA AAGCAATTCA TACTCAGCCC GCCAATATTG TCGCTCAAAA ACTAGCCTTA
TTACCCCAAC AGCAAGCAAT CCCTCCAGGG TTAACAGTCA GGCAATTGGT ATCATTAGGA
CGCACCCCAC ACCAACCTTG GTGGCAATGG GAATTAAATG TAGAAGATAG AGAAAAAGTA
GCCGAAGCTT TACATTTAAC TCAGATGGAA AGCTATCAGG AACGTTTAGT AGAACAACTT
TCTGGTGGCG AAAGACAAAG AGCTTTTTTA GCATTAGCTT TGGCACAAGA CCCGAAAATT
TTGTTATTAG ATGAACCCAC AACTTATTTA GATATTCGCT ATCAATTAGA ACTATTAGAA
CTACTAAAAA ATCTGAATCA AAAGCCAGGC ATTACCATTT TGACGGTTTT ACATGAAATC
AACTTAGCTG CTAGATATAG TTCTCGAATT GCTCTACTTT ATCAAGGTAA TATTTTTGCT
TTAGGAGAAC CAGAAATTGT TCTTACACCC GAAAATTTAG CTGTAGTGTT AGGCGTGGAA
GTTGCTATCT TGAATACTCC TGTAGGATTG CAAATTTGTC CCTTAGCGCC AATTAACAAA
CAAATTGAAT AG
 
Protein sequence
MPLETQNLTG GYTAKTVVKN ISLAIEKGEW LSLVGANGSG KSTLLKLMSR LLIPQTGIVL 
LDGKAIHTQP ANIVAQKLAL LPQQQAIPPG LTVRQLVSLG RTPHQPWWQW ELNVEDREKV
AEALHLTQME SYQERLVEQL SGGERQRAFL ALALAQDPKI LLLDEPTTYL DIRYQLELLE
LLKNLNQKPG ITILTVLHEI NLAARYSSRI ALLYQGNIFA LGEPEIVLTP ENLAVVLGVE
VAILNTPVGL QICPLAPINK QIE