Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4880 |
Symbol | |
ID | 3679204 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 6143637 |
End bp | 6145304 |
Gene Length | 1668 bp |
Protein Length | 555 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637720238 |
Product | Beta-lactamase-like |
Protein accession | YP_325372 |
Protein GI | 75911076 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1236] Predicted exonuclease of the beta-lactamase fold involved in RNA processing |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.419128 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.0000027158 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGGAATA ATTTGTCCAC ATATTCCAAT ATTGAGACAG GGGAAGCAGC AACCGAACTA GAATGTTTTC CCTACAGTGT TCAGCACAAT GATGAAGGTG TATGTTTATT AGTGCGGATG GGGCCGCATC GAATTCTGTT GGATTGTGGT TTAGCAGACA TTTCTTCTAT CCAAAAGAGT GTAACTCCAT CAGCAAAGCG GGGTAATCCA CCTTTACCAG CAGATTTAGT TTTAGTTACC CATGCCCACC CAGATCACGC TAGAGGTTTA CTAGCACTGC ATCAAGCTTT TCCTAATTTA CCTATCTATG GTAGCGAGGT AACCAGCAAG TTGCTGCCTT TGAATTGGTT AGACCGCAAC CCCCAGGAAA TTCCCCAACT GTGTCACGCC TTACCGTTGC GATCGCCTGT AGAACTACAA GACGGGTTAG TTGCCGAAAT CTTCCCCGCC GGACACTTAC CAGGCGCAGT GGCAATTCTC CTCACATACA CCACAGAACA TCGCTCATAC AAATTACTCT ATACAGGGGA TTTCTTTTTA TCTAACTCTC GCTTAGTTGA AGGTTTGCGG TTAGAAGAAC TGCGCGGTAT AGACTTAAAT GTGTTGATTA TTGAAGGGAC TTACGGCACA TCCAGACACC CCCACCGCCG CAACCAAGAA AACCAACTAG CCGAGAGAAT TAATCGCGCC ATTAGCGATC GCTGTTCTGT TATCCTCCCC ACCCCCGCTT TAGGCTTAGG ACAAGAACTG TTGATGTTGC TGCGTTCTCA TCACCACTTC ACCGGCAGAG ATTTAGATAT TTGGGTGGAT GGCGCTGTTG CTATTGGCTG TGATGCTTAC TTGGAACTGC TACCACACCT ACCAGCATCA GTCCAAAACT TCGCCCGCCA TCAACCCTTA TTTTGGGATG AGCGAGTGCG TCCCCGCGTG CGCCGCTTGC AACCAGAAAA CCGCAGCATA GTAGGTAAAT CGCCTTGTAT TGTCCTAACA GATTCCACAT CTGATTTAGA ACAGTACTGT CAACCAGAAA CCGGGCCTTG GCTCATCTTA TTGCCAGAAA AAATTGATAT AAAAGTTAAT AAAAAATACT CAGCCCCCAC CACAGTAGAA AGTTATCTCC TAGCTCAACA CAGTGATGGG CCGGGAACTA CCCAATTAAT TCATAATTTA CGTCCCCAGC ACGTCGTTTT TGTTCACGGT TCCCCTGCCT ACCTAGCAGA TTTGACCTGT TTAGAAGAAT TGCAGAACCG TTATCACATC CATTCACCGG CGGCTGAGAC AATGGTAGAA CTGCTTATCG GCGAAACATT TTTACAACCA GCCCCCCCAG AAACAAATTA TGAAGGTGAA CTGACAGAGT TAGGAACAGT CATCACCATC AGCATCCCCG AAGCCATTAC CGCCGATCCC CGGTGGCGAC AGTTCGCCGA TACTGGTTTA ATTGAAGCCC GTTGGCAGGG GGAAGAACTG GTATTACGGG GATTAACCCA AAGAGAACTC CTCAATCAAA ATAGCGATCG CTACATCTCC CCCGAAATTA ATTGCTGCGG CACTTGTCGC CATCAACGAG GACAACGCTG CTGGAACCCC TCCTCTCCCC TATACAACTT TAGAGTGACT CTAGAGGGTC ACTGTCCCGC TTTTGAGCGA TTAGCGAATG GTGAATAG
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Protein sequence | MRNNLSTYSN IETGEAATEL ECFPYSVQHN DEGVCLLVRM GPHRILLDCG LADISSIQKS VTPSAKRGNP PLPADLVLVT HAHPDHARGL LALHQAFPNL PIYGSEVTSK LLPLNWLDRN PQEIPQLCHA LPLRSPVELQ DGLVAEIFPA GHLPGAVAIL LTYTTEHRSY KLLYTGDFFL SNSRLVEGLR LEELRGIDLN VLIIEGTYGT SRHPHRRNQE NQLAERINRA ISDRCSVILP TPALGLGQEL LMLLRSHHHF TGRDLDIWVD GAVAIGCDAY LELLPHLPAS VQNFARHQPL FWDERVRPRV RRLQPENRSI VGKSPCIVLT DSTSDLEQYC QPETGPWLIL LPEKIDIKVN KKYSAPTTVE SYLLAQHSDG PGTTQLIHNL RPQHVVFVHG SPAYLADLTC LEELQNRYHI HSPAAETMVE LLIGETFLQP APPETNYEGE LTELGTVITI SIPEAITADP RWRQFADTGL IEARWQGEEL VLRGLTQREL LNQNSDRYIS PEINCCGTCR HQRGQRCWNP SSPLYNFRVT LEGHCPAFER LANGE
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