| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4816 |
|---|
| Symbol | |
|---|
| ID | 3679392 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 6054172 |
|---|
| End bp | 6055200 |
|---|
| Gene Length | 1029 bp |
|---|
| Protein Length | 342 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 637720173 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_325308 |
|---|
| Protein GI | 75911012 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.24802 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.260723 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAAATC CTCAATTGCA ATTAGAGCCT CCTCCTCAAG ATTTAGTCTC TCCACTGTTG
GAATTACGAG ACTATTATGC TCGTCTTGTA GAAGAGTACG AAACCTTATT TACACAAGCG
CGATCGCAGC TGGATCATGT AGAAGCTTTA TTATCTACTT GGTCTCCTAG TGCGGAAAAG
AAAGAGCAAA TATCCATCAG TGGTATCTCT CCAGACGTTT CCACCTCTTT CCCCAAAAAA
TCTCTACCAT CTGCAACTAA TGAGATTTCT CCCACTGAGG TTAACTTGGT GAAGTCTCAG
GAACTTGAGT CCCAAAACTC AGAAAGCTTG GAAATAGAGA GTTTTGCCAC TACAGATGAA
GATAACAACG AGTCTCCAGA ACCAAGTTCT TCAACAACGA TAGAAATTAC TCCAGAAACC
ATTAAGGGAA CTGATATCCC GATGTTACCT GAGTATCAAT CTCTCACTCG TATGGAAGCG
ATTAAAAAGC TACTAGAAGA ACATCTTGGC GCAGTATGTC ATATAGATTT CATTGTGCGA
TCGCTTTATG GAGAGTTGGA GTCTTATATT TTTAGAGTAG TCAAAGGTAG AGTCCAATCA
TCTCTAACAC AAGGTAGAGA AAGACAAGCG TGGTTTGGCA TCCCTGACGA ACCCGGATGT
TACACTCTGG ATTTAGGCTT GGTAACTTCT AACCGTACTC ATACTTACGC CCAAAATGGC
AGAAGTAAGA AGAAGAAACC TGTCATCATC CCCAAGACAA AAGTCATCCC CATGTTAGAA
CCTTTTGAAG GGCAGTTTTT AATTGATGCT CTGAGTGTTT TCTTCAAACA AAATCCAGGT
AAAGTTTTTA GTGTCGCTGA AGTCATTTCT GGACTTTATG GAGAACTAGA TGAAGAAGAC
ACCAGAGAAG TTAAAGGCAA AGTCTTGAAT GAACTCTCAC GGGGTTATCG TACGGGACGA
TTTGCTAGAT TACCTAATAA AGTCGGTTTT TATACCTTGG ATTTAAAGTT GGCGGCTAAG
TCGGGGTAA
|
|---|
| Protein sequence | MINPQLQLEP PPQDLVSPLL ELRDYYARLV EEYETLFTQA RSQLDHVEAL LSTWSPSAEK
KEQISISGIS PDVSTSFPKK SLPSATNEIS PTEVNLVKSQ ELESQNSESL EIESFATTDE
DNNESPEPSS STTIEITPET IKGTDIPMLP EYQSLTRMEA IKKLLEEHLG AVCHIDFIVR
SLYGELESYI FRVVKGRVQS SLTQGRERQA WFGIPDEPGC YTLDLGLVTS NRTHTYAQNG
RSKKKKPVII PKTKVIPMLE PFEGQFLIDA LSVFFKQNPG KVFSVAEVIS GLYGELDEED
TREVKGKVLN ELSRGYRTGR FARLPNKVGF YTLDLKLAAK SG
|
|---|
| |