Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4733 |
Symbol | |
ID | 3679713 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5934340 |
End bp | 5936166 |
Gene Length | 1827 bp |
Protein Length | 608 aa |
Translation table | 11 |
GC content | 37% |
IMG OID | 637720089 |
Product | von Willebrand factor, type A |
Protein accession | YP_325225 |
Protein GI | 75910929 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1240] Mg-chelatase subunit ChlD |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.357685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAATTTTA ACTACTTGAG ATATTTTTTG CAATTTACTT CAATACCCAG TATTTGTCTC TTGTTGATAT TGTCAATTTC TCAATTTTCT AAAGTATTGG CTCAAAATCC TAAAGGTGGA ATTGACTGGA TTGTAGTAGT AGATACTTCT GCTTCCATGC GTGGTGTCGG TGGTACAAGA AATATCTTTG CTCAAGTCAA GAATTCTATT AATGAATTTG TCAACACTGC CAAATTAGGG GATACAGTTA CTATTTATAA CTTTGATAGT GATGTAACTT TGCAAGCCCA AGAAATTCCT ATTGTCAGCA ATCCAGATCG GGGTAAGCTC AAACAAATTA TTAACAACCT CAAAGCTGAT GGTGTGCGTA CTCACACAGG TAAGGCAGTA CAACAAGCGC TCTCTACTTC TGCCAAATTA AATCAACGTC CTAATACTGC GGATAGGACT GTGAGTATAG TTTTTTTAAC AGATGGATTG GAAGATGTCC AAGGTATTCC TAATCCTGTA CCGATTCCTC AAAGTACGCA ACTTTTACGC GAACAAGAAT GTAAACCTTA TGTATTTTTC GTATCTTTAG GATTGAAAGA ACACGAAAAA CAATTAAATG AATTTGCTAA TAATCCAGCA CTTTGTGGCA AAGGAAGGGT CTTGCGTGAC CCTGGAGGAG TGCAATTAAA CAAGTTGGCT CAAAATATTA GACCAACACT AATTCAACCT CAGATTGATT TTAGTTTATC TACTGTTGAT TTGCCGCCTG TATTGCCAGG AACAACGACA AAAGCACTAA ATATTAATAG CATTAGCAAT GTCAATGCTA AGGTTAGTTT ACAACTAGAA GACCTAGAAA AAAGTGGTAT CAGCCTAGTC TCACCAAAGA GAATTAATTT AGCTGCCAAT AAACAACAAG TTATTCCTAT TAGTTTACAA ATCCCCGTAA ATGCACAGGG AGGTAATCGG AAACTGCGCT TATTATTGAC GGCAACAGAT AAAGCTATTG CTCCACAAGC TATTGATTTA TCTGTCACGA TTAAACCCCA ATTGTCAGTG CAACCAAGTA GCTTTAACTT TGGTTCTGTA GAATCAGGAA AAACTAGCCA AACGCAAACG TTAATAGTTC GTAGCAGCAT ATCTGGAACA GCTAGCTTAC AACTGCAAGG CAAGACTAAA GATATTTCTT TAAAAGAGCC TTCAACATCT GTATCTTTGG CAGTCGGAGA AACTAAAATA CCTATACAGA TTGAGGTGGC TGATAATAGT TTTGATGGTA AGCGTAAATT CAATGTAGTT GTTACTCCAG ATAACCCGCT TACTAGTCCC CTCAGTGCAG AAGTTCAGAT GCAAATCTTG ATGCCATTGG GACGAAAAAT CGTTATTTGG ACGCTATTGA TATTACTGCT TTTCTTAATT ACCTTAAGCA TAATTTGCTT GATTCAACGT AAAACTCCTT GGGAATTAGC CCAAGATATT GGCACTCGCA ACCATCTAGA AGGGGAAATA GAACTATTAG AACCAGCCCC CATATCACCG GAAGAACAAT ATATCAGTCT TACCCATCAG CATAGGCAAA AAGTTAACTT GAGTGCATTA GTTCCAGCGA TCGCCTCTAC AAATAGTGAT GCAGAATTAG TCATCAATTG GCAATCTGGT AAAAAATATG TATATATACG GAGTGTAAGC GGTATTACTT TTGTCAATAA TGAAAAGATA ACTACATATC AACTTTACGA TGAAGACACA ATCCAGGTTG ATAACGTAAA GCTGCGATTT AACTGGATTG GCAATCAACG GCCCTATGAA CAAAACAGTG GGCTGACAGA TTTTTAA
|
Protein sequence | MNFNYLRYFL QFTSIPSICL LLILSISQFS KVLAQNPKGG IDWIVVVDTS ASMRGVGGTR NIFAQVKNSI NEFVNTAKLG DTVTIYNFDS DVTLQAQEIP IVSNPDRGKL KQIINNLKAD GVRTHTGKAV QQALSTSAKL NQRPNTADRT VSIVFLTDGL EDVQGIPNPV PIPQSTQLLR EQECKPYVFF VSLGLKEHEK QLNEFANNPA LCGKGRVLRD PGGVQLNKLA QNIRPTLIQP QIDFSLSTVD LPPVLPGTTT KALNINSISN VNAKVSLQLE DLEKSGISLV SPKRINLAAN KQQVIPISLQ IPVNAQGGNR KLRLLLTATD KAIAPQAIDL SVTIKPQLSV QPSSFNFGSV ESGKTSQTQT LIVRSSISGT ASLQLQGKTK DISLKEPSTS VSLAVGETKI PIQIEVADNS FDGKRKFNVV VTPDNPLTSP LSAEVQMQIL MPLGRKIVIW TLLILLLFLI TLSIICLIQR KTPWELAQDI GTRNHLEGEI ELLEPAPISP EEQYISLTHQ HRQKVNLSAL VPAIASTNSD AELVINWQSG KKYVYIRSVS GITFVNNEKI TTYQLYDEDT IQVDNVKLRF NWIGNQRPYE QNSGLTDF
|
| |