Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4726 |
Symbol | |
ID | 3679706 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5913695 |
End bp | 5916175 |
Gene Length | 2481 bp |
Protein Length | 826 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637720082 |
Product | Na-Ca exchanger/integrin-beta4 |
Protein accession | YP_325218 |
Protein GI | 75910922 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTATTA ACGGCACTTC TGGTGTGGAT GAGTTATATG CCAATAAAGA TAACCAAGTT TTTGGTTGGG AAGGCGATGA TATTCTAGAT GCTTCTAACG GTGAAGGAAA TAATTTATTA GCGGGTGGTG CTGGTAGCGA TCGCCTTTTT GCCAACAATA ATGATACCCT CAAAGGTGAC GCTGGCGAAG ATTATCTATA TGCGTTGGGT AGTCTAGGCT TCAATACACT AGAAGGTGGT GATGATAACG ATCAGCTGTT TGTAGTCGAG GGTGGAAATA ACACCCTGGA TGGAGGACAA GGAAGCGATC GCCTGATAGT TTTAGATGGT AGTGGTTACA ATACCCTCGC TGGGGGACTG GGAAACGATT TATTAGATGT CTCTAACGGT ACAGGCAATA ACATCCTCTA CGGTAATGAG GGCGATGATA TCCTGATTGG TGGAGTCAAT ACTGACCGAT TATTTGGTGG TGCTGGAGAT GATTTACTCT TCGGTGGTAG AAGAGGTAGC CAATTAACCG GAGGTACAGG CTTAGATAGA TTTTTCCTTA CCAGTGCAGC AGTTCCCGAA GTCCCCATCG AAGTATTAGA CTTTACTAAA AATGACGATA AAGTTATAGT TGCCGGTATC CCTGAAGTGC GGACATTCCA AGATTTGCAA TTGCAGCAGA CCGGTGCTGA TACAGTTGTC AAAGCTAGAA TAAATAATAC TGTGCGAGAG TTAGGCATTT TGAGAAACAT CCAAGCCAAC ACTCTAACAC CAGATGATTT TGACTACACA ACCGCTATTT TCTCTACTAC CAACTCTTTT GCCACCGAAG GCACTAGCAT CACCTTCACC ATTAACCGTA CAGCAGATAC CCAAACTCAG CAAACTGTGA CGGTATCTAC ATCTATAACC ACAGGAGACA CAGCTAGTAA TACTGACTTT GTAGCCAAAA CCCAAACCCT GACTTTTGAA CAGGGAGAAA CCCAGAAAAC TTTTACTGTA GACACCACTC AAGATTTCTT AGTTGAAGCA AACGAAAGCT TTACCGTCAG TTTGAGCAAT CCTACTAATG GTGCAATTCT CAGTCCTACA GCAGCCACAG CTAAAGGCAC TATCAACGAT GATGATAATG CAGATGTCAT CATTACCCAG ACTGGTAATA ACACTATAGT TACAGAAAAT GGGACAACTG ATAGTTACAC CATAAAACTC ACTAGTCAAC CTACATATGA TGTCATTATC AATATCAGTA ATGGTCAACA AATTCGTACT AATCCCAGAA CTTTGACCTT CACTACCGAA AATTGGAATG TAGCGCAAAA TGTCACTGTA ACAGCAGTAG ATGATTTCCT AGTAGAAGGT GACGGTAATG ATACTATTAC CCATACTGCT ATCAGTAACG ATGTCAATTA CAATAACATT CTCATAAATC CTATAGAAGT AGGCATCACT GATAACGATA TCCCACTATT TCAGAACCCT AACAGCGATA TCTTTACCAT CAAAGGCAAC AGTGACAAAG TAAATCTCCA AGTCACTCTT ACAAGACGCA ATTCCAATTT TACCAATGAA TTAAGCGTCT TTACAGTAGA TGATGCTAAT GGCACCATTA ATGGTATTGC TCCTGGTGCA GTCGGTTATA CTGAAGCAGC GCTACAACGT GCCAGAGTAA TTTTCTCAGC TATAGCTAAC AACCCAAACG GATTTAACTC CAATAATCTA GCTAGTTTGT TGGAATTTAA TTCTGGCGAT AATTTGAGGT TTTATTTAGT CAGAAATAGT AGTACAGATG CCGTACTAGC AGGAATCACA CCCATCTCAG ATGTAGTATT GGCTAATTCC TCAACCCAAA AAATTACCAA CTTAGGAACA GATGGGTTTT CCTTAGGATG GGAAGACGGA TTTGGTAATA ATAGTGGATT TGCAGATTTA GTAGTCAAGA TTCAGACGAC AAATCAAACT TTACCTTTAG GTGCAAATTT ACAAAGTCAA TCACAGGGAG AATTGATTGA TTTACGAGGG GTGACACAAT CAGTAAAAGC TGATTTTGTT GTTAATAGAG AAGCGGCTTT CAACAACTTC ATCGGCTTCT ATCAGGTGAC TGATGAGAAT GGTGGTATTG ACACCAATAA TGATGGTTCC GCAGATATTC TCCCTGGACA ATCTGGTTAT ACTCAAGCTG CTGTTAATGG TCGTGTTCCT GGGATTGATT TGGTCGTGAA TAACCGAGGA ACTGCAACTT ATACTGGCAC GTTCCAACCC GGTTCTTTAT TTGCACCATT CATCATTATT AATAGTAGAC CAGAGACAAT TTTAGATAAC AATCCCAATA ACGACCCAGC CGTATATTTT TTATTCTTGG GCGCTAACCG TAATAGAGTT GATCATATTC GTCTATTGGC AAACAATGTC TTTGGCTTTG AGGATTTACC AAATGGTGGA GATAAAGACT TCAATGATAT GATTGTGCGA GTCAATCTAA GTATTGCTTG A
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Protein sequence | MIINGTSGVD ELYANKDNQV FGWEGDDILD ASNGEGNNLL AGGAGSDRLF ANNNDTLKGD AGEDYLYALG SLGFNTLEGG DDNDQLFVVE GGNNTLDGGQ GSDRLIVLDG SGYNTLAGGL GNDLLDVSNG TGNNILYGNE GDDILIGGVN TDRLFGGAGD DLLFGGRRGS QLTGGTGLDR FFLTSAAVPE VPIEVLDFTK NDDKVIVAGI PEVRTFQDLQ LQQTGADTVV KARINNTVRE LGILRNIQAN TLTPDDFDYT TAIFSTTNSF ATEGTSITFT INRTADTQTQ QTVTVSTSIT TGDTASNTDF VAKTQTLTFE QGETQKTFTV DTTQDFLVEA NESFTVSLSN PTNGAILSPT AATAKGTIND DDNADVIITQ TGNNTIVTEN GTTDSYTIKL TSQPTYDVII NISNGQQIRT NPRTLTFTTE NWNVAQNVTV TAVDDFLVEG DGNDTITHTA ISNDVNYNNI LINPIEVGIT DNDIPLFQNP NSDIFTIKGN SDKVNLQVTL TRRNSNFTNE LSVFTVDDAN GTINGIAPGA VGYTEAALQR ARVIFSAIAN NPNGFNSNNL ASLLEFNSGD NLRFYLVRNS STDAVLAGIT PISDVVLANS STQKITNLGT DGFSLGWEDG FGNNSGFADL VVKIQTTNQT LPLGANLQSQ SQGELIDLRG VTQSVKADFV VNREAAFNNF IGFYQVTDEN GGIDTNNDGS ADILPGQSGY TQAAVNGRVP GIDLVVNNRG TATYTGTFQP GSLFAPFIII NSRPETILDN NPNNDPAVYF LFLGANRNRV DHIRLLANNV FGFEDLPNGG DKDFNDMIVR VNLSIA
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