Gene Ava_4682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4682 
Symbol 
ID3679799 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5846562 
End bp5847893 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content42% 
IMG OID637720038 
ProductWD-40 repeat-containing protein 
Protein accessionYP_325174 
Protein GI75910878 
COG category[R] General function prediction only 
COG ID[COG2319] FOG: WD40 repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGATTG ATTTTGGACT GGCTAGACAA TTTATTTCTG GTACAGTGCA ACAACATACA 
CAAAGCTTTA CCCCTGGTTA TGCGCCACCG GAACAGTATG CACCCATAGA AGAACGGGGA
GAATATATTG ATGTTTACGC CTTAGCTGCC ACATTATATT CTTTGCTGAC TGGGCAATTG
CCAATGCCAG CACCAGCTAG ACTGCAAAAT TTTACCCTAC AACCACCAAA GGATTTGAAT
CCCAGTGTGA GCGACAGGGT GAATGAGGCA ATTATGAAAG GGATGGCGTT AAATTACAAA
TTCCGTCCCC AGTCGGTGCA GGAGTGGTTG GATTTGTTGG GTGCGGGGAT AGTAGTACCA
ACACAACCTG TAATATCTTC ATCTAATACA TATTTATCTG CGAAAATATC ACCAACACAA
CCTATAACAT CCGTATCCCA GATATCCTCA TCGTGGGAAT GTATCCATGT CATCCCTGCT
GTGTCTGGAA AAATAGCTTT TAGTCCCAAG GAAAATATAT TAGCGAGCGT GTCTAGTGGT
GGTTGGGACA GCAATATCAA ACTATGGGAA GCCCTAACAG GTAGAGAGAT TTACAGCTTA
ACAGGACATT CTTGGTCAGT TTACGCGATC ACCTTCAGTA ATGATGGACA AATCCTCGCT
AGTGGGGGTG GAGACGGAAA TATTAAACTA TGGGAAGTTG TTTCAGGACA AGAAATTCGC
ACATTGACTG GTCATTCTTG GGCGATTTAT GCAGTTACTT TCAGTAGTAA TAGAGTAGTT
CTAGCTAGTG GTAGCGGAGA CAAAACTATC AAACTTTGGG ATTTGGCAAC AGGTCAAGAA
ATAAGTACCC TGACTGGTCA TGCCGAATCA ATTAATTCCC TAGCATTTAG CAATAATGAG
TTAACCTTGG CTAGTGGTAG TGTAGACAAA ACTATCAAAC TCTGGGATTT GGAGACGGGC
AAAGAAATTT ATACACTAAC TGGTCATTCT GGAACAGTTA ACTCTATTTG TTTGAGTAAT
GATGGACAAA TATTAGCTAG TGGTAGTGTA GACAAAACTA TCAAACTCTG GGATTTGGAG
ACGGGCAAAG AAATTTGCAC CCTTATAGGT CATTTAGAAT CGATTGAATC TGTAACTATC
AGCAGCGATG GGCAAATACT GGCTAGTGCT AGTGTGGATA AAACTGTGAA AATTTGGGAA
ATGGCAACAG GTAAAGAAGT TTTCACACTT AGTCATTCTA GCAGTGTTAA TTCTATCGCC
TTTAGCCCTG ATGGGAATTT ACTTGCTGCT GGAGATTCTG GCGGAAATAT CAAAATATGG
CGACGCAGCT AG
 
Protein sequence
MLIDFGLARQ FISGTVQQHT QSFTPGYAPP EQYAPIEERG EYIDVYALAA TLYSLLTGQL 
PMPAPARLQN FTLQPPKDLN PSVSDRVNEA IMKGMALNYK FRPQSVQEWL DLLGAGIVVP
TQPVISSSNT YLSAKISPTQ PITSVSQISS SWECIHVIPA VSGKIAFSPK ENILASVSSG
GWDSNIKLWE ALTGREIYSL TGHSWSVYAI TFSNDGQILA SGGGDGNIKL WEVVSGQEIR
TLTGHSWAIY AVTFSSNRVV LASGSGDKTI KLWDLATGQE ISTLTGHAES INSLAFSNNE
LTLASGSVDK TIKLWDLETG KEIYTLTGHS GTVNSICLSN DGQILASGSV DKTIKLWDLE
TGKEICTLIG HLESIESVTI SSDGQILASA SVDKTVKIWE MATGKEVFTL SHSSSVNSIA
FSPDGNLLAA GDSGGNIKIW RRS