Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4682 |
Symbol | |
ID | 3679799 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 5846562 |
End bp | 5847893 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637720038 |
Product | WD-40 repeat-containing protein |
Protein accession | YP_325174 |
Protein GI | 75910878 |
COG category | [R] General function prediction only |
COG ID | [COG2319] FOG: WD40 repeat |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCTGATTG ATTTTGGACT GGCTAGACAA TTTATTTCTG GTACAGTGCA ACAACATACA CAAAGCTTTA CCCCTGGTTA TGCGCCACCG GAACAGTATG CACCCATAGA AGAACGGGGA GAATATATTG ATGTTTACGC CTTAGCTGCC ACATTATATT CTTTGCTGAC TGGGCAATTG CCAATGCCAG CACCAGCTAG ACTGCAAAAT TTTACCCTAC AACCACCAAA GGATTTGAAT CCCAGTGTGA GCGACAGGGT GAATGAGGCA ATTATGAAAG GGATGGCGTT AAATTACAAA TTCCGTCCCC AGTCGGTGCA GGAGTGGTTG GATTTGTTGG GTGCGGGGAT AGTAGTACCA ACACAACCTG TAATATCTTC ATCTAATACA TATTTATCTG CGAAAATATC ACCAACACAA CCTATAACAT CCGTATCCCA GATATCCTCA TCGTGGGAAT GTATCCATGT CATCCCTGCT GTGTCTGGAA AAATAGCTTT TAGTCCCAAG GAAAATATAT TAGCGAGCGT GTCTAGTGGT GGTTGGGACA GCAATATCAA ACTATGGGAA GCCCTAACAG GTAGAGAGAT TTACAGCTTA ACAGGACATT CTTGGTCAGT TTACGCGATC ACCTTCAGTA ATGATGGACA AATCCTCGCT AGTGGGGGTG GAGACGGAAA TATTAAACTA TGGGAAGTTG TTTCAGGACA AGAAATTCGC ACATTGACTG GTCATTCTTG GGCGATTTAT GCAGTTACTT TCAGTAGTAA TAGAGTAGTT CTAGCTAGTG GTAGCGGAGA CAAAACTATC AAACTTTGGG ATTTGGCAAC AGGTCAAGAA ATAAGTACCC TGACTGGTCA TGCCGAATCA ATTAATTCCC TAGCATTTAG CAATAATGAG TTAACCTTGG CTAGTGGTAG TGTAGACAAA ACTATCAAAC TCTGGGATTT GGAGACGGGC AAAGAAATTT ATACACTAAC TGGTCATTCT GGAACAGTTA ACTCTATTTG TTTGAGTAAT GATGGACAAA TATTAGCTAG TGGTAGTGTA GACAAAACTA TCAAACTCTG GGATTTGGAG ACGGGCAAAG AAATTTGCAC CCTTATAGGT CATTTAGAAT CGATTGAATC TGTAACTATC AGCAGCGATG GGCAAATACT GGCTAGTGCT AGTGTGGATA AAACTGTGAA AATTTGGGAA ATGGCAACAG GTAAAGAAGT TTTCACACTT AGTCATTCTA GCAGTGTTAA TTCTATCGCC TTTAGCCCTG ATGGGAATTT ACTTGCTGCT GGAGATTCTG GCGGAAATAT CAAAATATGG CGACGCAGCT AG
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Protein sequence | MLIDFGLARQ FISGTVQQHT QSFTPGYAPP EQYAPIEERG EYIDVYALAA TLYSLLTGQL PMPAPARLQN FTLQPPKDLN PSVSDRVNEA IMKGMALNYK FRPQSVQEWL DLLGAGIVVP TQPVISSSNT YLSAKISPTQ PITSVSQISS SWECIHVIPA VSGKIAFSPK ENILASVSSG GWDSNIKLWE ALTGREIYSL TGHSWSVYAI TFSNDGQILA SGGGDGNIKL WEVVSGQEIR TLTGHSWAIY AVTFSSNRVV LASGSGDKTI KLWDLATGQE ISTLTGHAES INSLAFSNNE LTLASGSVDK TIKLWDLETG KEIYTLTGHS GTVNSICLSN DGQILASGSV DKTIKLWDLE TGKEICTLIG HLESIESVTI SSDGQILASA SVDKTVKIWE MATGKEVFTL SHSSSVNSIA FSPDGNLLAA GDSGGNIKIW RRS
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