Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4667 |
Symbol | |
ID | 3679823 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5830208 |
End bp | 5830912 |
Gene Length | 705 bp |
Protein Length | 234 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637720023 |
Product | Short-chain dehydrogenase/reductase SDR |
Protein accession | YP_325159 |
Protein GI | 75910863 |
COG category | [R] General function prediction only |
COG ID | [COG4221] Short-chain alcohol dehydrogenase of unknown specificity |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAGAATA AAGTTGTGGT AATTGTGGGT GCGAGTGGCG GTATTGGTTC AGCCTTGGCT GATAAACTAG CTTCTGTTGG GGCGAAATTA GTGCTAGCAG CCAGAGATAG CAGTCGTTTG GCGGCGTTGG CGAATGATTT ACCGGGGGAA GTCTTAACTA TTCCTACAGA CATTACTGAC GCGTCACAGG TGGAGAATTT AATCCAAAAA ACAGTGGCGG AGTTTGGTCA AATAGATGTA TTAGTAAACG CAGCTGGTGT TGGTATTCTC AAGCCGTACA ACAGCGTGGA ACCAGCCGAT TTAGACAAAA TGTTAGATGT CAACCTCAAA GGTAGCTTCT ACACAACTCA AGCAGCAGCC GAAGAGATGC AGAAACGCAA GTCTGGACAT ATTTGCAATG TCGTGGGAAT TTTAGGTAAG CACTCAATGC CGATGGCTGC TGCTTATTCT GCCTCTAAGT TTGGTGTTGT GGGTTTTAGC AAATGCTTGG CGGAAGAACT GAAGCGTTTT GGGATTAAAT TTACCTTATT TTATTTTGGT GGCGTAGACT CCCCATTCTG GGATAATGTC AGTCTGAAGG TAGACAGGAA AAAAATGCTG AGTACTGAGA CTGCCGCTAA TGCTATTTTC TTTGCTCTCT CGGCTGAACC ACAAGCTGTA CCGCTAGAAA TTAACATTCA GCCTGATAGC CACTTGTTTT TCTAG
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Protein sequence | MQNKVVVIVG ASGGIGSALA DKLASVGAKL VLAARDSSRL AALANDLPGE VLTIPTDITD ASQVENLIQK TVAEFGQIDV LVNAAGVGIL KPYNSVEPAD LDKMLDVNLK GSFYTTQAAA EEMQKRKSGH ICNVVGILGK HSMPMAAAYS ASKFGVVGFS KCLAEELKRF GIKFTLFYFG GVDSPFWDNV SLKVDRKKML STETAANAIF FALSAEPQAV PLEINIQPDS HLFF
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