Gene Ava_4667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4667 
Symbol 
ID3679823 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5830208 
End bp5830912 
Gene Length705 bp 
Protein Length234 aa 
Translation table11 
GC content45% 
IMG OID637720023 
ProductShort-chain dehydrogenase/reductase SDR 
Protein accessionYP_325159 
Protein GI75910863 
COG category[R] General function prediction only 
COG ID[COG4221] Short-chain alcohol dehydrogenase of unknown specificity 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATA AAGTTGTGGT AATTGTGGGT GCGAGTGGCG GTATTGGTTC AGCCTTGGCT 
GATAAACTAG CTTCTGTTGG GGCGAAATTA GTGCTAGCAG CCAGAGATAG CAGTCGTTTG
GCGGCGTTGG CGAATGATTT ACCGGGGGAA GTCTTAACTA TTCCTACAGA CATTACTGAC
GCGTCACAGG TGGAGAATTT AATCCAAAAA ACAGTGGCGG AGTTTGGTCA AATAGATGTA
TTAGTAAACG CAGCTGGTGT TGGTATTCTC AAGCCGTACA ACAGCGTGGA ACCAGCCGAT
TTAGACAAAA TGTTAGATGT CAACCTCAAA GGTAGCTTCT ACACAACTCA AGCAGCAGCC
GAAGAGATGC AGAAACGCAA GTCTGGACAT ATTTGCAATG TCGTGGGAAT TTTAGGTAAG
CACTCAATGC CGATGGCTGC TGCTTATTCT GCCTCTAAGT TTGGTGTTGT GGGTTTTAGC
AAATGCTTGG CGGAAGAACT GAAGCGTTTT GGGATTAAAT TTACCTTATT TTATTTTGGT
GGCGTAGACT CCCCATTCTG GGATAATGTC AGTCTGAAGG TAGACAGGAA AAAAATGCTG
AGTACTGAGA CTGCCGCTAA TGCTATTTTC TTTGCTCTCT CGGCTGAACC ACAAGCTGTA
CCGCTAGAAA TTAACATTCA GCCTGATAGC CACTTGTTTT TCTAG
 
Protein sequence
MQNKVVVIVG ASGGIGSALA DKLASVGAKL VLAARDSSRL AALANDLPGE VLTIPTDITD 
ASQVENLIQK TVAEFGQIDV LVNAAGVGIL KPYNSVEPAD LDKMLDVNLK GSFYTTQAAA
EEMQKRKSGH ICNVVGILGK HSMPMAAAYS ASKFGVVGFS KCLAEELKRF GIKFTLFYFG
GVDSPFWDNV SLKVDRKKML STETAANAIF FALSAEPQAV PLEINIQPDS HLFF