| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4649 |
|---|
| Symbol | |
|---|
| ID | 3679864 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 5812759 |
|---|
| End bp | 5813817 |
|---|
| Gene Length | 1059 bp |
|---|
| Protein Length | 352 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637720005 |
|---|
| Product | 3-deoxy-7-phosphoheptulonate synthase |
|---|
| Protein accession | YP_325141 |
|---|
| Protein GI | 75910845 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2876] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase |
|---|
| TIGRFAM ID | [TIGR01361] phospho-2-dehydro-3-deoxyheptonate aldolase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 37 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.376747 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTAG TCATGAAAGT CGGTTCCCCA GAAGTGGAAA TCAACCGGAT TAATGATGAA
TTAACCAGTT GGGGGCTGAC ACCAGAAAAA ATTATCGGCA AACACAAAGT AGTAATTGGC
TTAGTAGGTG AAACCGCCGA TTTAGACCCC TTACAAATCC AAGAAGTTAG CCCTTGGATT
GAGCAAGTAT TACGGGTAGA ACTGCCTTAT AAACGCGCTA GCCGCCAATA TCGTCACGGT
GAAGCCTCGG AAGTAGTTGT TAATACTCCA GATGGTCCAG TCGTATTTGG TGAAAACCAA
GCTTTAGTGG TGGTTGCTGG TCCCTGTTCC GTCGAAAATG AGGAAATGAT TATTGAGACG
GCGCAGCGCG TCAAGGCAGC CGGCGCTAAG TTTTTACGCG GTGGTGCATA TAAGCCCCGT
ACTTCACCTT ACGCTTTTCA AGGTCACGGC GAAAGTGCTT TGGAATTGTT GGCAAAGGCG
CGGGATGTTA GCGGCTTAGG TATCATCACC GAAGTGATGG ACGCGTCGGA ACTGGATATT
ATTGCAGAAG TGGCTGATGT TATCCAGGTA GGTGCAAGAA ATATGCAGAA TTTCTCCCTA
CTGAAAAAAG TAGGGGCGCA GCCAAAACCA GTATTACTGA AGCGAGGGAT GGCAGCTACT
ATCGAAGATT GGTTGATGGC AGCCGAGTAC GTTCTAGCAG CAGGTAACCC TAATGTAATT
TTATGTGAAC GAGGTATTCG TACTTTTGAC CGTCAATATA CACGTAACAC TTTAGATTTG
TCGGTAGTTC CAGTATTGAG GAAATTAACT CACCTACCAA TTATGATTGA TCCCAGTCAT
GGTACTGGTT GGGCTGAGTA TGTACCATCA ATGGCGATGG CAGCGATCGC AGCTGGTACT
GATTCTTTGA TGATTGAAGT ACACCCCAAT CCCAAAAAAG CCCTATCCGA CGGGCCGCAA
TCCCTCACAC CAGAACATTT TGACCGCTTA ATGCAGGAAT TAGCAGTCAT TGGTAAAGCT
GTAGGACGCT GGCCACAACC AGCAGTTGTA ACTGCATAA
|
|---|
| Protein sequence | MIVVMKVGSP EVEINRINDE LTSWGLTPEK IIGKHKVVIG LVGETADLDP LQIQEVSPWI
EQVLRVELPY KRASRQYRHG EASEVVVNTP DGPVVFGENQ ALVVVAGPCS VENEEMIIET
AQRVKAAGAK FLRGGAYKPR TSPYAFQGHG ESALELLAKA RDVSGLGIIT EVMDASELDI
IAEVADVIQV GARNMQNFSL LKKVGAQPKP VLLKRGMAAT IEDWLMAAEY VLAAGNPNVI
LCERGIRTFD RQYTRNTLDL SVVPVLRKLT HLPIMIDPSH GTGWAEYVPS MAMAAIAAGT
DSLMIEVHPN PKKALSDGPQ SLTPEHFDRL MQELAVIGKA VGRWPQPAVV TA
|
|---|
| |