Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4629 |
Symbol | nagB |
ID | 3679998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5789054 |
End bp | 5789830 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719984 |
Product | glucosamine-6-phosphate deaminase |
Protein accession | YP_325121 |
Protein GI | 75910825 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase |
TIGRFAM ID | [TIGR00502] glucosamine-6-phosphate isomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00554039 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTAGCCG CTACAAACTT TTTTCGTGTT GATCATCTGT CAGTCCAAAT TTACAAATCT GAAGCCGACA TGGCTCAGGA TGTGGCAGCG ATTGTACGCA AGTATCTACA ATCTTTACTA GAAGAAAAAA AGACTGCTGC TGTGTTGCTA GCAACAGGAA ATTCTCAACT AAAATTTTTG GATGCGTTGA TAGCCTTGGG TGGTATAGAT TGGTCAAGAA TTACCTTATT TCATTTGGAC GAATATTTAG GAATTACGGC TGATCATCCG GCAAGTTTTC GCCGCTATAT GCAGGAACGC GTAGAAAAGC GAGTTTTTCC CCAACAATTT CACTATATTG AGGGTGATAC ATTAGAACCC TTGGCAGAAT GCGATCGCTA TACTAAATTA CTACAAGCAC AACCAATAGA CCTGTGTTGT CTTGGCGTTG GTGAAAACGG ACACTTAGCT TTTAATGATC CATCTGTAGC GAATTTCCAA GACCCTTACA GCGTCAAGCT GGTGAAACTA GATCCGGTAA ACCGTCAACA GCAGGTTAAT ACAGGACAAT TTCCTCATCT TGATAGTGTT CCTCAGTACG CTTTTACTGT CACCTTGCCA TTAATCTGTT CAGCTAAAAA AATATTCTGT CTAGCACCAG AACAACGTAA AGCACAGATT GTCAAACAAA TGCTACAAGG GTCAATTAGT AAAACTTGCC CAGCTTCTGT GTTACGCCAA CAACCACAAG CAACTTTATT TTTGGATATT AATTCAGCTA ACTTATTATC CTCTTAA
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Protein sequence | MVAATNFFRV DHLSVQIYKS EADMAQDVAA IVRKYLQSLL EEKKTAAVLL ATGNSQLKFL DALIALGGID WSRITLFHLD EYLGITADHP ASFRRYMQER VEKRVFPQQF HYIEGDTLEP LAECDRYTKL LQAQPIDLCC LGVGENGHLA FNDPSVANFQ DPYSVKLVKL DPVNRQQQVN TGQFPHLDSV PQYAFTVTLP LICSAKKIFC LAPEQRKAQI VKQMLQGSIS KTCPASVLRQ QPQATLFLDI NSANLLSS
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