Gene Ava_4623 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4623 
Symbol 
ID3679992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5782890 
End bp5783993 
Gene Length1104 bp 
Protein Length367 aa 
Translation table11 
GC content36% 
IMG OID637719978 
Producthypothetical protein 
Protein accessionYP_325115 
Protein GI75910819 
COG category[S] Function unknown 
COG ID[COG2170] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value0.522937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.127148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTATTTT CATTCGGCAT CGAACATGAA GTCGCTTTTC TCAACAGAGA AGGAAAGTTG 
GCAGATTTTG ACTCTACAAC ATTTGCAGAG TTCAATCAAG TCGTAGACAG ATTACCCATA
TACCCTAATG ATCATTTGCA ATTACGCGTG GGTGATGCAG GCATTAGAAA GAAGCGATGG
TATATTGAGG GGTTTGAAAG ATTTGCTGAT TCAGATGAGG TAATTGATTG TCTGTCAAAG
GGCATAGAAA TTAGAACAAC CATTCATTCT AATATTCAAA ATGCCATCAC AGAACTATCA
GATAGTTTTA ATTTATTATG TGAAGTTGCG GCTGAATTTG GCTTTTCACC AATATTAACT
AGCTTTCATC CTTATAAAAC ATCTTTTGCA CCCAATCCAC CATTAAATGA ATATGAACTT
AAGCAGTTAC AAACCGATCC TGATGATCAA ACTGCTAACA TTTATATGGT TACATATGGG
CCAGATTTAA ATATTTCTGT TGCCGATTTA CCCCATGAAC GTGTAATTGA TATCGGCAAA
AAGTTAACAT ATTACAGTCC TTATATTGTG CCTTTTAGTT ACAGTTCACC TTTTTATAAT
GGCACTTTAT GGGAAGGATT ATCAGTCAGG ACCTTTATTA GAACAGGCAA AAGACCAGCA
ACTTTAATAT TTGTTCAAGG AAAAGAGCAA CTAATTAATA GTGTGCCAGC ATTAACCAAA
ATTGCTCGCC TACCTGCGGA AGTAGGTCGT ATAGAATTTA AAGCTTTTGA TAGTTGTGAT
GACTTCTCTA TTTATGCAGC ATTGCTGGCG CTATTAAAAG GTTTAGTTAT AGATGAATCT
CTGCCAGGTA GGGCTACTGT ACCTGATGCG GAATTACATA AACTGTCTGC AAAATTTGGC
TTCGATGATG AAGGTATTTT TACGAATGCT GCAACAATTT TGCAAGCTGC TGAGTTTGCC
CTGAGAGATG ATCCAGATAT TGCTCTATTA GCACCATTAA AGGTAATTTT GACAAAAAGG
AGAACAAAAT CTCATACATT AATAGAATTA TTTAAAAATT TAGGTTCAAT AGAAGAAACA
TTAAAATGTA CCTATCAGAC GTAG
 
Protein sequence
MVFSFGIEHE VAFLNREGKL ADFDSTTFAE FNQVVDRLPI YPNDHLQLRV GDAGIRKKRW 
YIEGFERFAD SDEVIDCLSK GIEIRTTIHS NIQNAITELS DSFNLLCEVA AEFGFSPILT
SFHPYKTSFA PNPPLNEYEL KQLQTDPDDQ TANIYMVTYG PDLNISVADL PHERVIDIGK
KLTYYSPYIV PFSYSSPFYN GTLWEGLSVR TFIRTGKRPA TLIFVQGKEQ LINSVPALTK
IARLPAEVGR IEFKAFDSCD DFSIYAALLA LLKGLVIDES LPGRATVPDA ELHKLSAKFG
FDDEGIFTNA ATILQAAEFA LRDDPDIALL APLKVILTKR RTKSHTLIEL FKNLGSIEET
LKCTYQT