Gene Ava_4621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4621 
Symbol 
ID3679971 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5780840 
End bp5781946 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content45% 
IMG OID637719976 
Producthypothetical protein 
Protein accessionYP_325113 
Protein GI75910817 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.220381 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAAGCA ATTTAGTTAT GTTCCCAATT GTCGAGGTTG TAAGGCCAGG TACGCAAGTC 
AAAGAAACAA ATTCTACTGA TTACGAAGGT GCCGAGCAGC AATTTTTATT ACTTTTGGCA
ACTGAGGACT TAGACGATAA CTTAGATAGA CAAGCTGCAA TTGTCAGTGA TTTTGAACAG
GCGGTTTCCA GGGCAATTAA TGGGGCTTAT AAACGTGAGT GCCAAGATGA CTTAGCACAT
CGGTTTTTGC AACGGATTCT CTATCGGATT AATCGGCTGA ATCTGTTTTG GTTTGATGAT
TTGCGACAGT ATACTAATGA GCGATCGCTC TATTTATCCT CATGTCGTAA CCAAATTGAG
GCTGCTTGGC AAAAGTGGGA ACTTGCACAA GTAGATGTCG CTGCAATACA AAAATTAGAT
GTCAAACAAG CATTAATAGA CCGTGCTGAT GCTGATTTAG ACCCGCCACT ATCAGCCGCT
AGTCGCTATA TTCGTGAAGA GATGAGCGAA GCTGGCTACC GTCAATTGTT GGCGATCGGT
TCTTTCGATG GTTTGGTTGA AGGTAGTCGT CTTTCCCGAA TTTTAGGCGG CGCAGCTAAT
GAGGTGCAGT GTACCCTCGT GCGGGTACTA CTGGAAGAGT ACGGCAACGG TCGTTTATCT
CGTAAGCATT CGACCTTTTT TGCTCAAATG TTGGCTGAGT TTGGTATGAA CACCACACCA
GAAGCATACT TTGATTTAGT CCCCTGGGAA GTTTTAGCTT GTGCCAATCA TAATTTCTTG
CTGACTGAAC GCAGACGTTA TTACCTGCGT TACAGTGGCG GATTGACCTA TTTTGAAGTA
GCTGGGCCTG CGGCTTATCG CAATTATCTC GCAGCCGCAC AAAGATTAGG ATTATCAAAT
GCAGCGATGG GTTATTGGGA ATTGCACATC AGGGAAGATG AACGCCACGG ACGCTGGATG
CTGGACGATG TGGCTTTGCC TTTAGCACAA CGTTATCCCG ATGATGCTTG GGAGTTAGTA
CTGGGATATG ACCAGGAAAA ATTAATGGGC GATCGCGCGG CTGAAGCTGT TGTCAGGTCT
ACTCGCCAAG CTGAATCAAT TAATTAA
 
Protein sequence
MQSNLVMFPI VEVVRPGTQV KETNSTDYEG AEQQFLLLLA TEDLDDNLDR QAAIVSDFEQ 
AVSRAINGAY KRECQDDLAH RFLQRILYRI NRLNLFWFDD LRQYTNERSL YLSSCRNQIE
AAWQKWELAQ VDVAAIQKLD VKQALIDRAD ADLDPPLSAA SRYIREEMSE AGYRQLLAIG
SFDGLVEGSR LSRILGGAAN EVQCTLVRVL LEEYGNGRLS RKHSTFFAQM LAEFGMNTTP
EAYFDLVPWE VLACANHNFL LTERRRYYLR YSGGLTYFEV AGPAAYRNYL AAAQRLGLSN
AAMGYWELHI REDERHGRWM LDDVALPLAQ RYPDDAWELV LGYDQEKLMG DRAAEAVVRS
TRQAESIN