Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4422 |
Symbol | |
ID | 3680453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5537617 |
End bp | 5538333 |
Gene Length | 717 bp |
Protein Length | 238 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637719775 |
Product | Pirin-like |
Protein accession | YP_324915 |
Protein GI | 75910619 |
COG category | [R] General function prediction only |
COG ID | [COG1741] Pirin-related protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTCAAA ATACAATCAA CAATCTCATT CATGATAGAA ATGCACGGGG TCGTAGTCAA ACAGGTTGGC TTGATAGTTA TCACACCTTT TCTTTCAGCA GTTTTTATGA TCCCAACCGT ATGGGATTCC GTTCCTTACG AGTCATCAAT GACGACCGCA TTGCACCTGG TGCAGGATTT CCCACTCATG GACATCGTGA TATGGAAATT CTCACTTATG TACTCTCAGG TGCAGTAGAG CATAAAGACA GTTTGGGTAC TGGTTCAGTT ATTCGTCCTG GCGATGTGCA GATTATGAGT GCTGGTACGG GAATTCAACA TAGTGAATTT AACCACTCAC GCACCGAAGC ATTACATTTA CTGCAAATCT GGATTTTACC TGACGAACAA GGATTAGCAC CCAGATACCA ACAGAAAGCT TTCACCCCAG AAGAAAAACG CGGTCAACTG CGTCTTGTAG CTGCTAAAGA CGGACGTGAT GGTGCTGTCA CTATTCACCA AAATGTTGAT ATCTACGCCT CTATTTTAAA ACCAGGTGAT GTAGTCAATT ATCACGTAAA AGGCGATCGC TATGCTTGGT TGCAAATCGC TCAAGGTGTC GCCACTTTAA ATGGTGAAGA ACTCAGAGCA GGTGATGGCG TACAAATCAA CACAGAAGAG CAACTGAAAA TCAGTACAAG CGTCGGTACA GAGTTATTGC TGTTCGATTT AGCCTGA
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Protein sequence | MSQNTINNLI HDRNARGRSQ TGWLDSYHTF SFSSFYDPNR MGFRSLRVIN DDRIAPGAGF PTHGHRDMEI LTYVLSGAVE HKDSLGTGSV IRPGDVQIMS AGTGIQHSEF NHSRTEALHL LQIWILPDEQ GLAPRYQQKA FTPEEKRGQL RLVAAKDGRD GAVTIHQNVD IYASILKPGD VVNYHVKGDR YAWLQIAQGV ATLNGEELRA GDGVQINTEE QLKISTSVGT ELLLFDLA
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