| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4410 |
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| Symbol | |
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| ID | 3680440 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5528955 |
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| End bp | 5530121 |
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| Gene Length | 1167 bp |
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| Protein Length | 388 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 637719763 |
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| Product | carbamoyl phosphate synthase small subunit |
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| Protein accession | YP_324903 |
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| Protein GI | 75910607 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0505] Carbamoylphosphate synthase small subunit |
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| TIGRFAM ID | [TIGR01368] carbamoyl-phosphate synthase, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 43 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.924948 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCCTGT CTGACGCAAT ACCTGCTCTC CTTGTCTTGG CAGATGGAAC TGCTTACCGT
GGTTGGTCTT TCGGTGCGAC GGGAACCACC ATTGGCGAAG TCGTCTTCAA CACCGGTATG
ACTGGCTATC AAGAAGTATT GACTGACCCT AGTTACTGCG GACAGATTGT CGTGTTTACC
TATCCCGAAT TGGGGAATAC AGGCGTTAAT CCTGAAGACG AAGAATCAGC ACGTCCCCAA
GTGCGGGGTG CGATCGCCCG AAATATTTGT CATAAACCGA GTAACTGGCG ATCGGCACAA
TCCTTACCCG ACTACCTCAA ACAGCACCAA ATCCCCGGTA TCTTTGGTAT AGATACCCGC
GCCCTCACTC GCAAAATTCG GATGTACGGA GCCATGAACG GCGGCATCTC CACAGAAATT
TTGGATGAAG CGGAGTTGTT AGAACAGGTA CAAGCAGCTC CCAACATGGC AGGCTTAAAT
CTAGTCCGGG AAGTTACCAC CTCTACAGTT TACGAATGGT CAGATCCCAC AACAGCAGTT
TGGGAATTTA ACCCAGAGGG TACAGTAAAT AATGGGGAAT CCTTGACAGT TGTCGCCCTA
GATTTTGGTG TTAAACGCAA TATATTACGT CGTTTAGCCA GTTATGGTTG CCGAGTCATT
GTTGTACCTG CCGATACATC ACCAGAAGCA ATCCTAAAAT ACAATCCAGA TGGTATTTTC
CTCTCGAACG GCCCTGGTGA CCCCTCGGCA GTTACAGAAG GTATTACCAC AGCCAAAGTA
TTGCTCGAAA GTGAAAAACC CATTTTCGGT ATTTGTATGG GACACCAAAT TTTGGGTCAC
GCCTTGGGAG CAGAAACCTT TAAGCTGAAA TTTGGACATC GGGGTTTAAA TCAACCAGCA
GGTTTACAAC AACGGGTAGA AATCACCAGC CAAAACCACA GCTTTGCCAT TGACCCAGAT
TCTTTACCTG AGGCAGTTGT GGAAATCAGC CACCTCAATT TAAACGATCG CACTGTTGCC
GGTCTGCGCC ACAAATCTCT ACCTATCTTT TCAGTACAGT ACCACCCAGA AGCCAGCCCT
GGTCCTCACG ATGCTGATTA CTTGTTTGCC CAGTTTGTTC ATCAAATGCG GACAACAAAA
CAAGCCACTA CAGCAGAAGT GAGTTAA
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| Protein sequence | MPLSDAIPAL LVLADGTAYR GWSFGATGTT IGEVVFNTGM TGYQEVLTDP SYCGQIVVFT
YPELGNTGVN PEDEESARPQ VRGAIARNIC HKPSNWRSAQ SLPDYLKQHQ IPGIFGIDTR
ALTRKIRMYG AMNGGISTEI LDEAELLEQV QAAPNMAGLN LVREVTTSTV YEWSDPTTAV
WEFNPEGTVN NGESLTVVAL DFGVKRNILR RLASYGCRVI VVPADTSPEA ILKYNPDGIF
LSNGPGDPSA VTEGITTAKV LLESEKPIFG ICMGHQILGH ALGAETFKLK FGHRGLNQPA
GLQQRVEITS QNHSFAIDPD SLPEAVVEIS HLNLNDRTVA GLRHKSLPIF SVQYHPEASP
GPHDADYLFA QFVHQMRTTK QATTAEVS
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