| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4401 |
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| Symbol | |
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| ID | 3680528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5514154 |
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| End bp | 5516079 |
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| Gene Length | 1926 bp |
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| Protein Length | 641 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637719754 |
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| Product | multi-sensor Signal transduction histidine kinase |
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| Protein accession | YP_324894 |
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| Protein GI | 75910598 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000108821 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.00000304156 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | GTGAGACCAT CAAATAATCA AGTTGCCAAA CTACCAGTTC ATCAGACAAA AGCGCCTCTG
CAAATTGGAG AATCTGGAAA AAAATACTTT AACTTCAAAG TTAGTTTAGA AACCGAAAAC
AATTTATATC AAGTTATAGA AAATTTTCAT AAAATTATTA TTGTATTCAC GAGTGATGGT
CATGTTTGCT ACACTTCACC TAATGTCACA GAAACTTTAG GGTATGAAGT AATAGAACTG
GAAGGTAAAT CTTTCGCTTC TTTTGTCCAC AATGATGATG TGCGACTATT TACTGATTAT
TTATCCACAG TTGCCAAATC TGGCAACAAG CATCAGCCGC TAGAATACCG GATAAAAGCC
AAAGATGGTA GCTGGCGATG GCAGGAAATT AGCACATCTG TCTTTAAAGA TGAAAATGGT
AATGTTGTGT ATTTTGTTGG CATTACTCAC GATATAACTG ACCGCAAACT TACAGAAGCG
GCGCTAGCAG AAAGAATCTT GTTAGCTAAC TTTCGGACAG CAATTGATAA TGTTTTTTCT
CAAAATCATA CATTACAACA GTTAATGCGT GGCTGTACTG AGACTATGGT GACACATCTC
AATGCAGCCT TTGCCCGCAT CTGGACACTA AATAAACAAA ATAACATCCT CGAATTGCAA
GTTAGTTCGG GGATGTATAC CCACATCGAT GGCCCCCATA GATTTGTACC AGTCGGTAAA
TTCAAAATAG GGTTAATCGC CGAAGAAGCC AAACCCCATC TCACCAACTC TGTACAAACC
GACCCCCGTG TAGGGAATAA AGAGTGGGCA AAGCAAGAGG GAATGATTGC CTTTGCTGGC
TATCCCTTGA TTGTGGAAGG AGAGATATTA GGGGTCATCG CCATGTTCTC TCGCCAAGTA
CTGAGCGAAT CTACCTTTGA AGCTTTGAGA ATTACAGCTC ATGAAGTTGC TATCGGCATT
AAGCGCAAGC AGATTGAAGA AGAACTAAGA AAATCCGAAG CTAAATACCG AGAAATTGCC
CAAGCGTCCC AAGAAAAAGC CCAAAAATTA GAAGCAGCTT TATGGGAACT CCAACAAACC
CAGGCACAAT TAATTCAAAC GGAGAAAATG TCCAGTTTAG GACAGTTAGT CGCGGGTGTT
GCCCATGAGA TTAATAATCC CGTGAATTTT ATCTACGGTA ATATCACCCA TACCCGTGAA
TATATAGAGG ATTTGCTTTA CTTGGTAAAA CTCTATCAAA GTCACTACAA CCCGGTAGCA
CCAGAAATCC TAGACCATAT CTACGGGATG GATTTAGAGT TTATTTCTCA AGATTTGCCC
AAAGTCCTCA ATTCAATGCA CATGGGAGCA GAACGTATTC GACAGATAGT CCTCTCTTTG
CGTAACTTTT CTCGCCTAGA CGAAGATGGC ATGAAAGCAG TAGATATTCA TGAAGGTATC
GATAATACAT TGCTATTATT GCAAAATCGT CTGAAAGCTA AACCAGGCTG TAGCGAGATT
CAAGTAATTA AAGAGTACGG CAACCTACCG AATATCTTAT GTCACGCCGG ACAACTCAAT
CAAGTATTTA TGAATTTACT GACTAATGCA ATTGACGCTT TGGAAGAGTC TGTTGCCAGT
AGTCAGTTGT CAGTGGTAAA TAGTAAAACA ACTAACAATC CCCGAATTCT GATTCGGACT
GAACTTACCA CCGAAAATCA GGTGATGATC TGCATTGCTG ACAACGGGAT GGGAATGGCA
GAGAAAGTTC GTAGCCAGCT ATTTGACCCT TTCTTTACCA CTAAACCCAT AGGTAAAGGC
ACTGGTATGG GACTATCAAT TAGTTACCAA ATTGTGGTGA AAAACCATCA GGGACAGTTA
CAGTGTATCT CTGCGCCAGG AAAGGGGGCT GAGTTTATCA TTACAATTCC AACTGGTGAT
GGGTGA
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| Protein sequence | MRPSNNQVAK LPVHQTKAPL QIGESGKKYF NFKVSLETEN NLYQVIENFH KIIIVFTSDG
HVCYTSPNVT ETLGYEVIEL EGKSFASFVH NDDVRLFTDY LSTVAKSGNK HQPLEYRIKA
KDGSWRWQEI STSVFKDENG NVVYFVGITH DITDRKLTEA ALAERILLAN FRTAIDNVFS
QNHTLQQLMR GCTETMVTHL NAAFARIWTL NKQNNILELQ VSSGMYTHID GPHRFVPVGK
FKIGLIAEEA KPHLTNSVQT DPRVGNKEWA KQEGMIAFAG YPLIVEGEIL GVIAMFSRQV
LSESTFEALR ITAHEVAIGI KRKQIEEELR KSEAKYREIA QASQEKAQKL EAALWELQQT
QAQLIQTEKM SSLGQLVAGV AHEINNPVNF IYGNITHTRE YIEDLLYLVK LYQSHYNPVA
PEILDHIYGM DLEFISQDLP KVLNSMHMGA ERIRQIVLSL RNFSRLDEDG MKAVDIHEGI
DNTLLLLQNR LKAKPGCSEI QVIKEYGNLP NILCHAGQLN QVFMNLLTNA IDALEESVAS
SQLSVVNSKT TNNPRILIRT ELTTENQVMI CIADNGMGMA EKVRSQLFDP FFTTKPIGKG
TGMGLSISYQ IVVKNHQGQL QCISAPGKGA EFIITIPTGD G
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