Gene Ava_4340 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4340 
Symbol 
ID3680682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5443686 
End bp5444663 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content36% 
IMG OID637719693 
Producthypothetical protein 
Protein accessionYP_324833 
Protein GI75910537 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG4759] Uncharacterized protein conserved in bacteria containing thioredoxin-like domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTAATA TTTTTTGTTC AGACTACACA AGGAAAGTAG AAGAAGACAT TATTGGTAGT 
GCTACTGATT ACCAAACATA TGTTCTTGTT GAGTGTCCTC AACCCTGGCT AAAAGATGCG
TTCAGTTCGA GATGGGTTCC GAATAATTTA CAGATGTTGG TAGAAGAAGT ATACAAAGCT
AAACTACCTA TCAGGTTTCT TTTGATTGCC AATGATCTTA CTCATAAAGC TGATCATACA
ACCCTTTTAA TTTATCAAAA ACAAGAAGGC TTAAGTCATG GATATCTCAA GCATGAATTT
AAATTAACGC ACATTGAACA AGTAGCTGGC GTTGTCAAAC AATGGTTATG GGGTAAACGA
CCAGAGTCTA ATATAGAAAC AAATATAACG AGAGATATTT TAGTTTGTAC ACATGGTAGT
TATGATAAAT GTTGTGCTAG ATATGGTAAT TCTTTTTATT TCTATGCTAA CGCTACTATT
GCCAATTCGC AGTTAGAAAA TGTCCGAATT TGGCAATCAA CTCACATTGG TGGTCATAGA
TTTGCACCCA CAGCAATAGA CCTACCAGAA GGTAGATATT ATGGGCTTTT AGATCAGGAT
TCTTTTCTAT CGATCTTGAC ACGTACTGGT GATATTCAAA GTCTAAGAAA AGTATATCGG
GGTTGGGGAA TTTTGCCCCC GGTTATTCAA GTTCTAGAAA GAGATTTAAT GTTGAGTCAT
GGATGGAGTT GGTTTAATTA CAGAGTCGCA GCCAAGATTC TAGAGCAAAG TTTGGACAAC
AACACTATGT TGGGTGAATT AATTTTTGAG CAAGGATCTA GCTCTGTATA TACATACCGA
GCTAAGTTGA TCAAAGATAT AGATAGAACT ATAAATGTGA AAAGTTCTTG TAGTACTAAC
CAAACTACAA CGATTGTCAA ATATGCTGTA GCTGATATTT GGTTAGTTAC CGAGAATGTC
TTGACTCTTA GTAAGTAG
 
Protein sequence
MSNIFCSDYT RKVEEDIIGS ATDYQTYVLV ECPQPWLKDA FSSRWVPNNL QMLVEEVYKA 
KLPIRFLLIA NDLTHKADHT TLLIYQKQEG LSHGYLKHEF KLTHIEQVAG VVKQWLWGKR
PESNIETNIT RDILVCTHGS YDKCCARYGN SFYFYANATI ANSQLENVRI WQSTHIGGHR
FAPTAIDLPE GRYYGLLDQD SFLSILTRTG DIQSLRKVYR GWGILPPVIQ VLERDLMLSH
GWSWFNYRVA AKILEQSLDN NTMLGELIFE QGSSSVYTYR AKLIKDIDRT INVKSSCSTN
QTTTIVKYAV ADIWLVTENV LTLSK