| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4326 |
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| Symbol | |
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| ID | 3680760 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5420279 |
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| End bp | 5421994 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 637719674 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_324819 |
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| Protein GI | 75910523 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0784] FOG: CheY-like receiver
[COG5002] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAGCA TCTGTTCACA GACCAATAAA ATCCAAGCGG TCAGAGTGCT GATTGTGGAA
GATGAATATA TCTTGGCGAT TAACTTACAA GAAAGTTTAG AGTCTTTAGG ATATACAGTT
GTAGATATTG CAGATTCCGC AGAGTTAGCC ATAGATAAAG CGACAGAACT ACAGCCAAAC
TTAATTTTGA TGGATATCAG GCTACGAGGT GAAGAAGATG GTATCCATGC AGCCGCAAAA
ATCTGGCAGA ATCTACAAAT TCCCATCATA TATGTGACAG GACATTCTGA TAAAAGCACT
GTCGAACGAG CAACACTCAC ATCCCCTTTT GGCTACATCC TCAAACCCAT CAGAGAGAAA
GAACTCTACG TCGCTATTCA AACAGCTCTC AACCGCTATG AACGTGAGCA ATTTTTGAGT
TCCGTGCTGC GATTTATGGG AGATGGTGTA CTAGTGGTTG ATTCTCAGCT GCACATCAAG
TATATGAATC CAGTTGCAGA AGCACTTACC GGTTGGCAAT TTGATGATGC ACAAGACAGA
AATTTAACCG AAGTTGTCCA GTTAATTGAT GAACAAACTC TCAATTCTAT TCAAAATCCT
ATCATCTCGG CTATTCAAAA ACAAACAACG GTTTATTTAG GCGATGGCGT TTCGCCGACA
GTCGGTCATC GCATTATGTT AATTACCAAA GATGGCACAA TGATCCCAGT TGCTGATAGT
GCTACACCCC TACGCAACAA CAACGGTGAC ATTACTGGCG CAGTCATGGT TTTTCGGGAT
GACACTCAAC GCCGACTTAC AGAAGAACGC AATCTCTCTG CTGAACGTAA TCGACAACTG
GAAATTCAAA TGGCAGAAAT GCAGCGCTTT AACCAGTTGA AAGAAGATTT TTTAGCATCT
ACCTCTAATG AAATGAGAAC GCCATTATCA AATATCAAAA TGGCCATTTC CATGCTAGAG
AATGTCATGA ATCAGCAGGG TCTTTTGAAA TCAGCTACTG CTTCTACTTC TGCATCCGTG
TCTCGTTACC TGGGTATTTT ACGTTATGAG TGCGAACGAG AGTTAACTTT GGTAGATGAT
TTAATTAATA TGCGAATAAT TGATACAGAA GGCTATCCTT TAGATATCAC TTATATTCAT
CTCCAATCTT TGCTATCCGA GATTATTAAC AGTTTTCAGG AAATTGCCCA AGCGCAAAAA
CAGATTTTAC AAGTTAATAT TTCTGATGAT TTACCAGCTT TAGTTTCTGA CAAAAGTATT
CTCAGTCAAA TCATCTCAGA ACTCCTCATG AATGCTTGTA AATATACTCC TCCCGGTGAA
CGCATTACCG TAACTGTACA TTTTGAACAG AACCAAAAAA GCTTAATACC AGAAGATGCT
CAATCTGGTT TATACAGAGC TTCTTCATCT CCTTATTTTC AAATTATAAT TAACAACTCT
GGAGTAGAAA TTCCTTCAAC AGAACAATCT CGTATTTTTG AGCCTTTCTA CCGATTTACA
TACAATAAAA CAATAGAAAA ATTATCCGTG TTTGACCAAT CTTACCAAAT TCCTCAAAGT
GATTATCAAC GGACTAGCGG TACAGGTTTG GGACTATCAC TAGTAAAAAA ACTAGTACAG
TGTATTCAAG GTACAGTTGA AGTTACGAGT GGTCATGGCT TAACTACTTT TATAGTTCAA
TTGCCATTGA GCTTATCAGC GAGTTATTCC GGATAA
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| Protein sequence | MISICSQTNK IQAVRVLIVE DEYILAINLQ ESLESLGYTV VDIADSAELA IDKATELQPN
LILMDIRLRG EEDGIHAAAK IWQNLQIPII YVTGHSDKST VERATLTSPF GYILKPIREK
ELYVAIQTAL NRYEREQFLS SVLRFMGDGV LVVDSQLHIK YMNPVAEALT GWQFDDAQDR
NLTEVVQLID EQTLNSIQNP IISAIQKQTT VYLGDGVSPT VGHRIMLITK DGTMIPVADS
ATPLRNNNGD ITGAVMVFRD DTQRRLTEER NLSAERNRQL EIQMAEMQRF NQLKEDFLAS
TSNEMRTPLS NIKMAISMLE NVMNQQGLLK SATASTSASV SRYLGILRYE CERELTLVDD
LINMRIIDTE GYPLDITYIH LQSLLSEIIN SFQEIAQAQK QILQVNISDD LPALVSDKSI
LSQIISELLM NACKYTPPGE RITVTVHFEQ NQKSLIPEDA QSGLYRASSS PYFQIIINNS
GVEIPSTEQS RIFEPFYRFT YNKTIEKLSV FDQSYQIPQS DYQRTSGTGL GLSLVKKLVQ
CIQGTVEVTS GHGLTTFIVQ LPLSLSASYS G
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