Gene Ava_4312 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4312 
Symbol 
ID3680824 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5402908 
End bp5403261 
Gene Length354 bp 
Protein Length117 aa 
Translation table11 
GC content43% 
IMG OID637719661 
Productmembrane protein of unknown function 
Protein accessionYP_324806 
Protein GI75910510 
COG category[S] Function unknown 
COG ID[COG1950] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value0.753835 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACACT TTTTATTGAC ATGGTTGGCT ACTGCGGTAG CTTTGCTAAT TACTGCCCAT 
ATTGTCCCTG GATTCGTTGT TAAGAGTTTT GTCGCGGCTC TAGTTGCCGT GATAGTGATT
GGGTTAGTCA ATGCTTTAGT CAGACCAATT CTCAGCATTT TGTCATTTCC CGTTACCTTA
CTGACTTTTG GCTTGTTCAC ATTTGTCATC AATGCTTTAA CCCTATGGTT AGCCAGCGCC
CTCACACCTG GTTCTGGTTT CCAGATTGAA GGCTTTGTCG CTGCTTTCTT GGGATCAATT
GTGCTGTCTA TTGTTTCCAG CCTCATTAAT TATCTTCTGC GAGCAGTCGA ATAA
 
Protein sequence
MKHFLLTWLA TAVALLITAH IVPGFVVKSF VAALVAVIVI GLVNALVRPI LSILSFPVTL 
LTFGLFTFVI NALTLWLASA LTPGSGFQIE GFVAAFLGSI VLSIVSSLIN YLLRAVE