Gene Ava_4296 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4296 
Symbol 
ID3680847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5385325 
End bp5385825 
Gene Length501 bp 
Protein Length166 aa 
Translation table11 
GC content42% 
IMG OID637719645 
Producthypothetical protein 
Protein accessionYP_324790 
Protein GI75910494 
COG category[S] Function unknown 
COG ID[COG4244] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.00940496 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGATT TTCTTACATC TTTGAACGAC CACAATTTAC CTTATCCAGA TACGATACAT 
CCCATCGTTG TTCACTTCGT AATTGCGATG GTATTGTTTG CATTTGCTTG TGATGTGATT
GGTTATTTAA CTGGTAAAAC TCGCCTATTT GAAGTGAGTT GGTGGAATAT GTTTGTGGCA
ACGATCGCCA TTTTTGTGGC GATTATTTTT GGTCAGTTTG AAGCTGGTTT AGCAAAACCT
TACGAAGTAG TTAAATCAGT CTTGAATCTA CATACCTTAC TTGGCTGGTC ACTTTCGGGA
ATTATCGCCG CCCTAACAGC ATGGCGCTAC GTCATTCGTC TCCGCAACCC CCTAAAAATC
CCCTTTCATT ACTTGGTTGC AGGATTGGTG TTAACCATAA TAGTTGGCTT GCAGGTATAT
CTCGGTGATC AACTGGTGTG GATATATGGA CTGCACACCG TACCAGTTGT TGAAGCGGTA
AAGGAAGGAC TTCTGCCATG A
 
Protein sequence
MFDFLTSLND HNLPYPDTIH PIVVHFVIAM VLFAFACDVI GYLTGKTRLF EVSWWNMFVA 
TIAIFVAIIF GQFEAGLAKP YEVVKSVLNL HTLLGWSLSG IIAALTAWRY VIRLRNPLKI
PFHYLVAGLV LTIIVGLQVY LGDQLVWIYG LHTVPVVEAV KEGLLP