Gene Ava_4213 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4213 
Symbol 
ID3680957 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5283253 
End bp5284482 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content48% 
IMG OID637719560 
ProductCys/Met metabolism pyridoxal-phosphate-dependent enzyme 
Protein accessionYP_324707 
Protein GI75910411 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG4100] Cystathionine beta-lyase family protein involved in aluminum resistance 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.226781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAGCT TGGAACAGCT GCGGCAAGCA GAACAGGCAC TGTTAGAGAT TTTTTCTGGA 
ATTGACGCTC AGGTCAAGCA AAATCTGAAA AGAGTGCTGG AAGCCTTTCG TAATCAACGC
GTAGGAGCGC ACCACTTTGC TGGTGTAAGT GGTTATGGTC ACGATGATTT AGGTCGAGAA
ACTTTAGACA AAGTTTTTGC CGAGGTAATG GGTGCTGAAG CTGCGGCGGT GCGGGTGCAG
TTTGTTTCGG GAACTCACGC GATCGCTTGC GCCCTGTTTG GTGTACTCCG GCCTGGTGAT
GAAATGTTAG CAGTAGTTGG TTCCCCCTAC GATACGCTCG AAGAAGTCAT TGGTTTACGG
GGTCAAGGTC AAGGCTCCCT TATTGAGTTT GGCATAAAAT ACCGCCAATT GGAGTTAACT
TCCCAAGGTT CTATTGATTG GCAAACTTTA AGCACTAGCA TTACTGATAA CACCCGCTTA
GTTTTAATTC AGCGTTCTTG TGGTTATTCT TGGCGACCTA GCTTATCCAT TGCCGATATT
GAAAAAGTGG TCAATTTAGT CAAACAGCAA AATCCTGACA CTGTTTGCTT TGTGGATAAC
TGCTACGGCG AATTTATCGA AACCCAGGAA CCTACCCACG TTGGTGCTGA TTTAATGGCT
GGTTCCTTGA TTAAAAATCC TGGTGGGACA ATTGTGACGG CTGGTGGTTA TGTAGCTGGA
CGGGCTGACT TAGTAGAAGC AGCCGCTTGC CGCCTGACTG CTCCTGGTAT TGGTAGTTAT
GGTGGGGCGA CATTTGACCA AAATCGCCTG TTATTTCAAG GATTATTTTT ATCGCCCCAG
ATGGTGGGTG AGGCGATGAA GGGAACTCAC CTGACTGGTT ATGTATTTGA CAAACTTGGT
TATCCAGTAA ATCCTGCACC CCTCGCCCCC CGTGGAGATG TTATTCAGGC GATTAAACTG
GGTTCTGGGA AGAAGCTGAT TGCCTTCTGT AAGGCTGTAC AACAGAATTC ACCCGTGGGT
TCTTACCTTG ACCCCGTTCC CGATGATATG CCGGGGTACG AGAGCCAAGT AGTGATGGCT
GGGGGGACAT TTATTGAGGG GAGTACTTTG GAATTTTCGG CGGATGGGCC TTTACGTGAG
CCTTATGTGG TGTATTGCCA GGGGGGGACT CATTGGAGTC ATGTGGCGAT CGCTCTAGAG
GCGGCGATCG ATGCAGTAGG AGAAGCTTGA
 
Protein sequence
MNSLEQLRQA EQALLEIFSG IDAQVKQNLK RVLEAFRNQR VGAHHFAGVS GYGHDDLGRE 
TLDKVFAEVM GAEAAAVRVQ FVSGTHAIAC ALFGVLRPGD EMLAVVGSPY DTLEEVIGLR
GQGQGSLIEF GIKYRQLELT SQGSIDWQTL STSITDNTRL VLIQRSCGYS WRPSLSIADI
EKVVNLVKQQ NPDTVCFVDN CYGEFIETQE PTHVGADLMA GSLIKNPGGT IVTAGGYVAG
RADLVEAAAC RLTAPGIGSY GGATFDQNRL LFQGLFLSPQ MVGEAMKGTH LTGYVFDKLG
YPVNPAPLAP RGDVIQAIKL GSGKKLIAFC KAVQQNSPVG SYLDPVPDDM PGYESQVVMA
GGTFIEGSTL EFSADGPLRE PYVVYCQGGT HWSHVAIALE AAIDAVGEA