| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4208 |
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| Symbol | |
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| ID | 3680952 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | + |
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| Start bp | 5273209 |
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| End bp | 5275086 |
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| Gene Length | 1878 bp |
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| Protein Length | 625 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637719555 |
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| Product | DNA-directed RNA polymerase subunit gamma |
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| Protein accession | YP_324702 |
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| Protein GI | 75910406 |
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| COG category | [K] Transcription |
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| COG ID | [COG0086] DNA-directed RNA polymerase, beta' subunit/160 kD subunit |
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| TIGRFAM ID | [TIGR02387] DNA-directed RNA polymerase, gamma subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGACCCG CCCAAACTAA TCAGTTTGAC TACGTTAAAA TCGGCTTGGC ATCACCAGAA
CGTATTCGCC AATGGGGTGA GCGTACATTA CCTAATGGTC AGGTCGTAGG TGAAGTCACC
AAACCAGAAA CGATTAATTA CCGGACTCTC AAGCCAGAAA TGGATGGCTT GTTTTGTGAG
CGCATCTTTG GCCCCGCGAA AGATTGGGAA TGCCATTGCG GTAAGTATAA GAGAGTCCGC
CATAGAGGCA TTGTCTGTGA GCGTTGTGGC GTGGAAGTTA CCGAGTCACG GGTACGCCGT
CACCGTATGG GGTACATCAA ACTTGCCGCC CCTGTTGCCC ACGTTTGGTA TCTCAAAGGG
ATTCCTAGCT ATATTTCTAT TCTGCTAGAT ATGCCTTTGC GGGATGTGGA GCAGATTGTC
TATTTCAACT CTTATGTTGT TCTCAGTCCC GGTAATGCTG AAACCCTAAC CTACAAGCAG
CTACTGAGTG AAGACCAGTG GTTAGAAATT GAAGACCAAA TCTATAGTGA AGATTCTCAG
TTGCAAGGTG TAGAAGTAGG TATCGGTGCT GAAGCACTGT TGCGCTTGCT GGCTGATATT
AATTTAGAGC AAGAAGCAGA AAGCCTCCGG GAAGAAATTG GTAGTGCTAA AGGACAAAAA
CGAGCAAAAC TCATTAAACG CCTGCGGGTA ATTGACAACT TCATTGCTAC CGGTTCTAAG
CCAGAGTGGA TGGTGATGAC AGTGATTCCC GTAATCCCTC CAGATTTGCG CCCAATGGTG
CAGTTAGATG GTGGACGGTT TGCAACCAGT GACTTGAATG ATTTGTATCG CCGGGTAATT
AACCGGAACA ATCGTCTAGC ACGACTGCAA GAAATTCTCG CACCGGAAAT TATTGTGCGG
AACGAAAAGC GGATGCTGCA AGAAGCAGTA GACGCTTTAA TTGACAACGG TCGTCGCGGA
CGCACCGTAG TTGGGGCGAA CAACCGACCC CTGAAATCTT TATCTGACAT TATTGAAGGG
AAGCAAGGGC GTTTCCGGCA AAACTTGTTG GGTAAACGGG TTGACTACTC TGGACGTTCT
GTAATTGTGG TTGGGCCTAA GCTAAAAATT CACCAGTGCG GCTTGCCCAG AGAAATGGCT
ATTGAACTAT TCCAGCCATT TGTGATTAAT CGCCTGATTC GTAGCGGTAT GGTGAATAAC
ATCAAAGCTG CGAAAAAGTT AATCTCTCGC AATGACCCCA GTGTTTGGGA TGTCCTGGAA
GAAGTGATTG AGGGACACCC AGTCATGCTC AACCGCGCGC CTACCCTACA CCGTTTGGGT
ATTCAGGCTT TTGAACCAAT TTTGGTGGAA GGTCGAGCCA TTCAACTCCA CCCCCTGGTG
TGTCCTGCAT TTAACGCTGA CTTTGACGGC GACCAAATGG CGGTACACGT CCCCCTATCC
TTGGAAAGTC AGGCGGAAGC ACGGTTATTG ATGCTGGCTT CTAACAACAT TTTGTCGCCA
GCTACAGGTA GACCAATTAT CACACCTAGC CAAGACATGG TGTTGGGGGC TTATTACCTG
ACTGCGGAAA ACCCAGGCGC TACAAAAGGT GCAGGTAAAT ATTTTGCTTC TCTGGATGAC
GTAATTATGG CATTCCAACA AGAGCAAATT GACTTACACG CTTACATCTA CGTGCGGTTC
GATGGGGAAG TGGAATCTGA TCAGCCAGAT ACAGACCCCC TGGAAGTGAC AAATAACGAT
GATGGTAGCC GGACTGTACT TTATAAGTAT CGCCGAGTCA GAGAAGACGC TCAGGGAAAT
TTAATTTCTC AGTATGTACG CACTACTCCA GGTCGCGTTA TTTACAATAA AGCGATTCAA
GAAGCACTTG CCAGTTAG
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| Protein sequence | MRPAQTNQFD YVKIGLASPE RIRQWGERTL PNGQVVGEVT KPETINYRTL KPEMDGLFCE
RIFGPAKDWE CHCGKYKRVR HRGIVCERCG VEVTESRVRR HRMGYIKLAA PVAHVWYLKG
IPSYISILLD MPLRDVEQIV YFNSYVVLSP GNAETLTYKQ LLSEDQWLEI EDQIYSEDSQ
LQGVEVGIGA EALLRLLADI NLEQEAESLR EEIGSAKGQK RAKLIKRLRV IDNFIATGSK
PEWMVMTVIP VIPPDLRPMV QLDGGRFATS DLNDLYRRVI NRNNRLARLQ EILAPEIIVR
NEKRMLQEAV DALIDNGRRG RTVVGANNRP LKSLSDIIEG KQGRFRQNLL GKRVDYSGRS
VIVVGPKLKI HQCGLPREMA IELFQPFVIN RLIRSGMVNN IKAAKKLISR NDPSVWDVLE
EVIEGHPVML NRAPTLHRLG IQAFEPILVE GRAIQLHPLV CPAFNADFDG DQMAVHVPLS
LESQAEARLL MLASNNILSP ATGRPIITPS QDMVLGAYYL TAENPGATKG AGKYFASLDD
VIMAFQQEQI DLHAYIYVRF DGEVESDQPD TDPLEVTNND DGSRTVLYKY RRVREDAQGN
LISQYVRTTP GRVIYNKAIQ EALAS
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