| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4187 |
|---|
| Symbol | |
|---|
| ID | 3680990 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 5245550 |
|---|
| End bp | 5246650 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637719534 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_324681 |
|---|
| Protein GI | 75910385 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 0.637966 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00122785 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTATAG CCACCGATAG CTTAAAGTTG ATTACAACGG TTGAACAATT AAAGTACTAT
CTCATCCAAG CAATGAAGAT AGAACACGCA ACCATTCCCC CTTATATGAC AGCGCTTTAC
TCTATTAAAC CCGGAAAAAA TTTAGAGGCT TTTCATATTA TCCGGGAGGT TGCTGTAGAA
GAAATGTTAC ACCTAACTCT CGTAGCTAAT GTTTATAATG CGGTGGGAGG CTCGTTTGCA
TCACCAGTCC TGACAGCACC TAACTTTATT CCCACATATC CGAGTTATTT ACCTACAGGA
TCTACAGACT TTAAAGTAGG TTTAACCAAG TTTTCCAAAA AGACTATAGA GACCTTTCGT
AAGATCGAAC GTTCTAAGGA TGTTGAAGAA GGTGATCCAT TAGTTGAGTC TCGAAGCTTA
CAAGAATATT TACTAGAAGT TGTAGGCTGC GATCCGACCA AAACTTTCTA CAGCATTGGC
TTATTTTATG CAGAGATCAT TCGTGGTCTC AATGCACTCT ATAAAGAAAA AGGTCCCGAC
CTATTTTGCG GCGATCCTCG GCGACAAATC ACCCCTGAAT ATTACTATAA CGGTGGTGGA
GATATCATCC CAGTGACCGA CCTGCGTTCG GCCATGCGAG CTTTAAAAGT AATTCAAGAG
CAGGGTGAAG GGTCAAGAAG TGGAACAATC TATGATGCAG AACGAGAACT AGCCCATGAC
TATCGTTTTC AGCAAATCCT ATTAGAAAAA TATTATGTGA TCGACAAAGA TGATCCGACA
AAATCCGATC AGCCCAATGA GCCTACAGGC AAATCCTTTA ACGTAGACTG GAATGAAGTT
TATCCCATTA AGGATAATGC CAAACTGAGT GATTATCCAG AGGGATCGGA AGTACGTACA
GCAGCCTTAG CGTTTCACTC TGCCTATAGT GAATTCCTAG CCAAAATTGA ATACGCTTTT
GATGGGCATC CTGAGCAGTT AGTTCCCGCA GTTGGGGGAA TGTTCCGTCT CAAAGAACAA
GCTAACAGTT TAATGCGTAA TCCTATTCCA GGAAATCCAG GAGTGAATGC GGCTCCTATT
TTTAAGTTAG ATAAGCGTTA A
|
|---|
| Protein sequence | MTIATDSLKL ITTVEQLKYY LIQAMKIEHA TIPPYMTALY SIKPGKNLEA FHIIREVAVE
EMLHLTLVAN VYNAVGGSFA SPVLTAPNFI PTYPSYLPTG STDFKVGLTK FSKKTIETFR
KIERSKDVEE GDPLVESRSL QEYLLEVVGC DPTKTFYSIG LFYAEIIRGL NALYKEKGPD
LFCGDPRRQI TPEYYYNGGG DIIPVTDLRS AMRALKVIQE QGEGSRSGTI YDAERELAHD
YRFQQILLEK YYVIDKDDPT KSDQPNEPTG KSFNVDWNEV YPIKDNAKLS DYPEGSEVRT
AALAFHSAYS EFLAKIEYAF DGHPEQLVPA VGGMFRLKEQ ANSLMRNPIP GNPGVNAAPI
FKLDKR
|
|---|
| |