Gene Ava_4179 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4179 
Symbol 
ID3681040 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5229675 
End bp5230259 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content38% 
IMG OID637719526 
Producthypothetical protein 
Protein accessionYP_324673 
Protein GI75910377 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000866231 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAAATA AGGATGATTA TCAAGAATTT CTTAAGGGAA AGTTTACGAG TTTAATTGAT 
TCGTTAAATC TCTCGGAATT ACAAACACAA TTTCTGTTTT CGCGTTGGTT AGATCAAATG
CTGTGGATGG AAGCACAAGC AGGTAAATCA AGGAATAGAT ATTACAGATT ACGATTGATC
ACAATTATTG GGGGTGTGGT TCTCCCTGCT TTAGTAAGTC TCAATATTAA CAGTTCTGAG
GTGCGGGAAA TTTTTGTTTG GGCTACTTTT TCTCTTAGCC AAATTGTAGC AATTAGCGCA
GCAGTTGAGG AATTTTTCCA CTATGGAGAA CGCTGGCGAC ACTATCGCCG CACGGCAGAA
TCTTTGAAAA CTCAAGGTTG GCAATTCTTT CAATTAACTG GCCCTTATGT GAATTATGGA
ACACACGATA AAGCATTTAG TTCTTTTGCC AATCAAGTGG AAGAAATTAT TCAGCGAGAT
GTAGAAGTTT ATGCTACTCA GGTTGTGCAA GAGAAGAAAC AGCAAGAAAA TGGTAATGAT
GACAAACAAG ATAATGTGAA AGAGAACAAA GAGAGTAAGG TATAG
 
Protein sequence
MANKDDYQEF LKGKFTSLID SLNLSELQTQ FLFSRWLDQM LWMEAQAGKS RNRYYRLRLI 
TIIGGVVLPA LVSLNINSSE VREIFVWATF SLSQIVAISA AVEEFFHYGE RWRHYRRTAE
SLKTQGWQFF QLTGPYVNYG THDKAFSSFA NQVEEIIQRD VEVYATQVVQ EKKQQENGND
DKQDNVKENK ESKV