Gene Ava_4153 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4153 
Symbol 
ID3681092 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5179732 
End bp5180553 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content43% 
IMG OID637719499 
Productnitroreductase 
Protein accessionYP_324647 
Protein GI75910351 
COG category[C] Energy production and conversion 
COG ID[COG0778] Nitroreductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000365143 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.488904 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAATC CTACTGAGTT ATTACATCGT CGTTACGGCG TAGACGCATT CAATGCAGAT 
ATTTCTTGGA ACGAGACATT ATCAACTTTA CTGTCTCACC GTTCGATTCG TTCTTACCTT
AGTGATTCCC TACCATCAAA CACTCTAGAA ACTTTGGTAG CAGCAGCCCA ATCTGCATCG
ACTTCCTCAA ATCTCCAGAC ATGGAGTGTA GTTGCTGTCC AAGATGCACA ACGTAAGGAG
AAGTTATCGC AGTTAGCGAA TAACCAAGCG CATATTCGCC AGTGTCCTTT ATTTCTGGTG
TGGTTAGCAG ATTTGGCAAG ACTAACATAC GTTGCTGAGA GTCAAGGATT ATCCCATGAT
GCTTTAGATT ATCTAGAAAT GTTTCTGATG GCGGCTATAG ATGCGACATT GGCGGCACAA
AATGCCGTTG TTGCTGCCGA ATCTCTGGGT TTGGGAACAG TTTATATAGG TGCATTGCGT
AACCGTCCAG AAGAAGTGGC AGAGGTTTTA AATTTACCGC CTCATGTCTT TGCAGTTTTT
GGGTTGTGCG TCGGTTACGC AGATTCATCT GTAAATGTGG AAGTTAAACC GCGTTTACCT
CAAGCAGCAG TATTGCATCG GGAGACTTAT CAATTGGAGA AACAAGACCA GGAAATTGCT
CTTTACAACC AAATCATGAA AGCATTCTAC AATTCCCAAC AGATGAATGT TGCTGGTGAT
TGGTCGGAAC ACTCAGCTAA ACGAGTAGCG TTTGCTGAAT CTTTATCAGG ACGCGATCGC
TTGCAGGAAG CTTTGAAAAA TTTAGGTTTT AAGTTGCGCT AA
 
Protein sequence
MTNPTELLHR RYGVDAFNAD ISWNETLSTL LSHRSIRSYL SDSLPSNTLE TLVAAAQSAS 
TSSNLQTWSV VAVQDAQRKE KLSQLANNQA HIRQCPLFLV WLADLARLTY VAESQGLSHD
ALDYLEMFLM AAIDATLAAQ NAVVAAESLG LGTVYIGALR NRPEEVAEVL NLPPHVFAVF
GLCVGYADSS VNVEVKPRLP QAAVLHRETY QLEKQDQEIA LYNQIMKAFY NSQQMNVAGD
WSEHSAKRVA FAESLSGRDR LQEALKNLGF KLR