Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_4138 |
Symbol | |
ID | 3681214 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | - |
Start bp | 5159350 |
End bp | 5160117 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 637719484 |
Product | ABC transporter-like |
Protein accession | YP_324632 |
Protein GI | 75910336 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00000371805 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00945872 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGTTGCAA ATTTAAAAGG TTCACGAATC AATATTTTGG ATCTAACTAA GGCTTTTGGT CATAAAACCG TTTTAAATTC ATTAAATCTA GAAGTAGCGC CTGGAGAGTT TATTGCTATT GTGGGGCGTA GTGGTTGTGG TAAAAGTACT TTATTGCGCC TTGTATCAGG GTTAGATAAA CCCACTACAG GCGGTATTTT GCTAGATGGG GAACCACTCC GTAAACTTAG TCATTCTGTT AGAGTGATGT TTCAAGAACC GCGTTTATTA CCTTGGAAAC GAGTGATTGA TAATGTGGGT CTAGGATTAC AAGAAAATTG GCAATCAAAA GCTACATGGG TATTAGAACA AGTAGGACTT AAAGATAGAG CCGGTGAATG GCCTCATGTA TTATCTGGAG GACAACGACA ACGGGTAGCA TTAGCCAGAG CATTGGTGAG TCAACCACAT TTACTACTAC TGGATGAGCC TCTGGGTGCA TTAGATGCGT TAACTCGTCT AGAAATGCAA TATCTCATCG AAGATTTGTG GCGAGAGCGA GGCTTTACGG CATTTTTAGT CACCCATGAT GTAGAAGAAG CTGTGGCGTT GGCAGATAGA GTCATAGTAA TTGAAGAAGG ACGGATTATG TTGGATTTAC CCGTAAGATT GCCACGCCCA CGAGATAGGG CTAGTGAACT ATTTATCAAT ATTAGAGAAG CTGTACTAGA GCAGGTTATG AATAATGAAA GTAATAATAA AAATCAATTA TTGCAGATGA GTCATTAA
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Protein sequence | MVANLKGSRI NILDLTKAFG HKTVLNSLNL EVAPGEFIAI VGRSGCGKST LLRLVSGLDK PTTGGILLDG EPLRKLSHSV RVMFQEPRLL PWKRVIDNVG LGLQENWQSK ATWVLEQVGL KDRAGEWPHV LSGGQRQRVA LARALVSQPH LLLLDEPLGA LDALTRLEMQ YLIEDLWRER GFTAFLVTHD VEEAVALADR VIVIEEGRIM LDLPVRLPRP RDRASELFIN IREAVLEQVM NNESNNKNQL LQMSH
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