Gene Ava_4138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4138 
Symbol 
ID3681214 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5159350 
End bp5160117 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content40% 
IMG OID637719484 
ProductABC transporter-like 
Protein accessionYP_324632 
Protein GI75910336 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000371805 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00945872 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTTGCAA ATTTAAAAGG TTCACGAATC AATATTTTGG ATCTAACTAA GGCTTTTGGT 
CATAAAACCG TTTTAAATTC ATTAAATCTA GAAGTAGCGC CTGGAGAGTT TATTGCTATT
GTGGGGCGTA GTGGTTGTGG TAAAAGTACT TTATTGCGCC TTGTATCAGG GTTAGATAAA
CCCACTACAG GCGGTATTTT GCTAGATGGG GAACCACTCC GTAAACTTAG TCATTCTGTT
AGAGTGATGT TTCAAGAACC GCGTTTATTA CCTTGGAAAC GAGTGATTGA TAATGTGGGT
CTAGGATTAC AAGAAAATTG GCAATCAAAA GCTACATGGG TATTAGAACA AGTAGGACTT
AAAGATAGAG CCGGTGAATG GCCTCATGTA TTATCTGGAG GACAACGACA ACGGGTAGCA
TTAGCCAGAG CATTGGTGAG TCAACCACAT TTACTACTAC TGGATGAGCC TCTGGGTGCA
TTAGATGCGT TAACTCGTCT AGAAATGCAA TATCTCATCG AAGATTTGTG GCGAGAGCGA
GGCTTTACGG CATTTTTAGT CACCCATGAT GTAGAAGAAG CTGTGGCGTT GGCAGATAGA
GTCATAGTAA TTGAAGAAGG ACGGATTATG TTGGATTTAC CCGTAAGATT GCCACGCCCA
CGAGATAGGG CTAGTGAACT ATTTATCAAT ATTAGAGAAG CTGTACTAGA GCAGGTTATG
AATAATGAAA GTAATAATAA AAATCAATTA TTGCAGATGA GTCATTAA
 
Protein sequence
MVANLKGSRI NILDLTKAFG HKTVLNSLNL EVAPGEFIAI VGRSGCGKST LLRLVSGLDK 
PTTGGILLDG EPLRKLSHSV RVMFQEPRLL PWKRVIDNVG LGLQENWQSK ATWVLEQVGL
KDRAGEWPHV LSGGQRQRVA LARALVSQPH LLLLDEPLGA LDALTRLEMQ YLIEDLWRER
GFTAFLVTHD VEEAVALADR VIVIEEGRIM LDLPVRLPRP RDRASELFIN IREAVLEQVM
NNESNNKNQL LQMSH