| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_4041 |
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| Symbol | aksA |
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| ID | 3682170 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 5026243 |
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| End bp | 5027361 |
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| Gene Length | 1119 bp |
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| Protein Length | 372 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637719393 |
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| Product | trans-homoaconitate synthase |
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| Protein accession | YP_324541 |
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| Protein GI | 75910245 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0119] Isopropylmalate/homocitrate/citramalate synthases |
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| TIGRFAM ID | [TIGR02660] homocitrate synthase NifV |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.397636 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACAACG TGGTTATTCA CATTAACGAT ACAACCTTGC GAGATGGGGA ACAGGCGGCG
GGTATAGCCT TTAATGTGGA AGAAAAAATT GCGATCGCCT CTCTACTCGA TTCTATCGGT
GTTCACGAAT TAGAAGTTGG CATTCCCGCA ATGGGACATG AAGAAGCTGA ATCGATTACA
AGGATTGCCA AATTAGGATT AAATGCCAAA CTACTCGGCT GGAATCGGGC GAATTTGTCA
GATATCCAAG CATCTATCGA TTGTGGTTTG GATAGAGTTC ATGTTTCTGT TCCCGTCTCC
GATATTCAGA TAGCTGCTAA ATTCAAAGGA CAACGACAGT TAGTCTTAGA TAAACTACGG
GATGCAATTA ATTTTGCCTG CGATCGCGGT TTATCTGTCT CCGTCGGTGG CGAAGACTCT
TCCAGAGCCG ATGAATCCTT CCTACTAGAA GTTGCCCAAT CTGCCCAAGA ATGGGGCGCG
TTTCGGTTTC GCTTCTGTGA TACCGTAGGA ATTCTCGACC CCACAACCAC CTACAAAAAA
GTTAGTCATT TGGTATCGCA CCTATCAATT GTTATCGAAA TGCACACACA TGACGACTTT
GGTATGGCCT TAGCGAACAC CTTAGCCGGT GTAAAAGCTG GCGCGATATC TGTGAACACC
ACCGTCAATG GTATAGGTGA ACGAGCCGGA AATGCACCCT TAGAAGAAGT AGTGATGGGA
CTCAAATATC TCTACGATAT ACCCACAGGT ATTGATACCA AACGACTCGT AGAAGTATCA
AGACTAGTCT CCAAAGCGAC TAATTTCCCT GTACTTCCTT GGAAAGCGAT CGTTGGTGAA
AATACCTTTG CACACGAATC AGGGATTCAT GCTCATGGCG TACTGCAAAA CCCCATCACC
TATGAACCAT TCGCACCAGA AGACGTAGGT TGGGAACGAC GCTTAGTAGT AGGTAAACAT
TCCGGTCGCC ATCTCCTACT CAGCGTCCTG GAACAACACG GTATCACCCT CGGCCAAGCC
GAAATTCAAT CAGTATTAGA TGCAGTCCGC CATCAATCAG TCAAAACCAA ACGCAGCCTC
ACCGTTGAAG AACTACTAAG TTTAGTTCCT CAAAGATAA
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| Protein sequence | MNNVVIHIND TTLRDGEQAA GIAFNVEEKI AIASLLDSIG VHELEVGIPA MGHEEAESIT
RIAKLGLNAK LLGWNRANLS DIQASIDCGL DRVHVSVPVS DIQIAAKFKG QRQLVLDKLR
DAINFACDRG LSVSVGGEDS SRADESFLLE VAQSAQEWGA FRFRFCDTVG ILDPTTTYKK
VSHLVSHLSI VIEMHTHDDF GMALANTLAG VKAGAISVNT TVNGIGERAG NAPLEEVVMG
LKYLYDIPTG IDTKRLVEVS RLVSKATNFP VLPWKAIVGE NTFAHESGIH AHGVLQNPIT
YEPFAPEDVG WERRLVVGKH SGRHLLLSVL EQHGITLGQA EIQSVLDAVR HQSVKTKRSL
TVEELLSLVP QR
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