Gene Ava_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_4027 
Symbol 
ID3681259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp5013399 
End bp5014790 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content45% 
IMG OID637719379 
Productoxidoreductase/nitrogenase, component 1 
Protein accessionYP_324527 
Protein GI75910231 
COG category[C] Energy production and conversion 
COG ID[COG2710] Nitrogenase molybdenum-iron protein, alpha and beta chains 
TIGRFAM ID[TIGR02932] V-containing nitrogenase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.762261 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTTAG CTGTAAATAA GAAAGAACGT GCTGGGGTAA TCAATCCCAT TTTTACCTGT 
CAGCCTGCGG GTGCTGAATA TGCAACCATC GGTGTGAAAG ATTGTATCCC CTTGGTGCAT
GGTGGACAAG GTTGCAGTAT GTTTGTCCGC TTGATTTTTG CCCAGCACTT GAAGGAAAAC
TTTGATATTG CATCTTCTTC ACTCCATGAA GCTAGTGCGG TGTTCGGTGG GATGCCACGG
ATCGAAGAAG GTGTGAAAAC CTTGGTAGCA CGTTATCCTG ACTTGCGTTT GATTCCCATC
ATCACCACTT GTTCTACTGA AACTATCGGG GATGACGTAG AAGGGACAAT CAACAAGGTC
AACAAGTTCT TAAAGAAAGA GTATCCAAAT CGGGAAGTGA AGTTGATTCC TGTACATACT
CCTAGTTACC GTGGTAGTCA GGTAACAGGA TATGATGCTG GTGTCACTTC CTTGATCACT
AACTTGGCGA AAAAAGGTGA ACCAAACGGT AAGTTGAACA TCATTACCGG TTGGGTTAAC
CCTGGTGATG TGACTGAAGT TAAGCACATC CTCAGCGAAA TGGGCGTTGA TGCCAATATC
TTATTAGATA CTGAAACCTT CAATGCTCCC ACCATGCCAG ATAAGAACAG CTTTACCTTT
GGTAATACTA CCATTGAAGA TATTGCTGGT TCTGCCAATG CGATAGGAAC GATCGCTCTG
TGCAAGTATG AAGGTGGTAA CGCCGCTAAA TTCTTACAAG AGCAATTTGA TGTTCCTGCG
ATCGTTGGGC CTACACCAAT TGGTATCAAG AATACTGACG CTTGGCTACA AAATATCAAG
AAACTAACCG GTAAACCAAT CCCAGAATCC TTGGTAGTAG AACGGGGTAA AGCGATTGAC
TCCTTGGCTG ACTTAGCTCA TATGTACTTT GCTAACAAGC GTGTAGCTAT TTACGGCGAC
CCCGATTTAG TAATTGGCTT GGCTGAGTTC TGCTTAGAAG TTGAATTAGA ACCAGTATTG
CTGTTGTTGG GTGATGATAA CCAAGCTGCT TCCAAAGACC CCAGATTAGC TGAGTTAGCT
AAGAGAGCAA ACCACGCTGA GTATGACATT GATGTCATCT GGAATGCTGA CTTGTGGGAA
CTGGAAAGCC GCGTGAAAGA AAAAGGCGAT ATCGATTTGA TTTTGGGTCA CTCCAAAGGT
CGGTATATTG CGATCGACAA CAAAATCCCA ATGGTACGCG TAGGCTTCCC CACCTTTGAC
CGTGCAGGTT TGTGGAAAAA CCCTGTGATT GGTTATCGCG GTGCGGAATG GTTGGGAGAT
GCGATCGCTA ACGCTATGTT TGCAGACATG GAATACAAGC ATGACCGTGA GTGGATCTTA
AACGTTTGGT AA
 
Protein sequence
MTLAVNKKER AGVINPIFTC QPAGAEYATI GVKDCIPLVH GGQGCSMFVR LIFAQHLKEN 
FDIASSSLHE ASAVFGGMPR IEEGVKTLVA RYPDLRLIPI ITTCSTETIG DDVEGTINKV
NKFLKKEYPN REVKLIPVHT PSYRGSQVTG YDAGVTSLIT NLAKKGEPNG KLNIITGWVN
PGDVTEVKHI LSEMGVDANI LLDTETFNAP TMPDKNSFTF GNTTIEDIAG SANAIGTIAL
CKYEGGNAAK FLQEQFDVPA IVGPTPIGIK NTDAWLQNIK KLTGKPIPES LVVERGKAID
SLADLAHMYF ANKRVAIYGD PDLVIGLAEF CLEVELEPVL LLLGDDNQAA SKDPRLAELA
KRANHAEYDI DVIWNADLWE LESRVKEKGD IDLILGHSKG RYIAIDNKIP MVRVGFPTFD
RAGLWKNPVI GYRGAEWLGD AIANAMFADM EYKHDREWIL NVW