| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3988 |
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| Symbol | |
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| ID | 3679662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Anabaena variabilis ATCC 29413 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007413 |
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| Strand | - |
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| Start bp | 4958808 |
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| End bp | 4960511 |
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| Gene Length | 1704 bp |
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| Protein Length | 567 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637719340 |
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| Product | histidine ammonia-lyase |
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| Protein accession | YP_324488 |
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| Protein GI | 75910192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2986] Histidine ammonia-lyase |
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| TIGRFAM ID | [TIGR01225] histidine ammonia-lyase
[TIGR01226] phenylalanine ammonia-lyase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.488939 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACAC TATCTCAAGC ACAAAGCAAA ACCTCATCTC AACAATTTTC TTTTACTGGA
AATTCTTCTG CCAATGTAAT TATTGGTAAT CAGAAACTCA CAATCAATGA TGTTGCAAGG
GTAGCGCGTA ATGGCACCTT AGTGTCTTTA ACCAATAACA CTGATATTTT GCAGGGTATT
CAGGCATCTT GTGATTACAT TAATAATGCT GTTGAATCTG GGGAACCAAT TTATGGAGTG
ACATCTGGTT TTGGCGGTAT GGCCAATGTT GCCATATCCC GTGAACAAGC ATCTGAACTC
CAAACCAACT TAGTTTGGTT CCTGAAAACA GGTGCAGGGA ACAAATTACC CTTGGCGGAT
GTGCGCGCAG CTATGCTCTT GCGTGCAAAC TCTCATATGC GCGGTGCATC TGGCATCAGA
TTAGAACTTA TCAAGCGTAT GGAGATTTTC CTTAACGCTG GTGTCACACC ATATGTGTAT
GAGTTTGGTT CAATTGGTGC AAGTGGTGAT TTAGTGCCAC TATCCTACAT TACTGGTTCA
CTGATAGGCT TAGATCCCAG TTTTAAGGTT GACTTCAACG GTAAAGAAAT GGATGCGCCA
ACAGCTCTAC GTCAACTGAA TTTGTCACCC TTGACATTGT TGCCGAAGGA AGGCTTGGCG
ATGATGAACG GCACTTCAGT CATGACAGGT ATTGCAGCAA ACTGCGTCTA CGATACTCAA
ATTTTAACTG CGATCGCTAT GGGCGTTCAC GCTCTAGATA TCCAAGCTTT AAACGGAACC
AATCAATCAT TCCATCCATT TATCCATAAT TCCAAACCAC ATCCTGGTCA ATTATGGGCA
GCAGATCAGA TGATTTCTTT GTTAGCCAAT TCCCAGTTAG TTCGTGATGA GTTAGATGGT
AAACACGATT ATCGTGATCA CGAGTTGATT CAAGATCGTT ACTCACTCCG ATGCCTTCCC
CAGTATTTGG GGCCAATCGT TGATGGAATT TCCCAGATTG CCAAACAAAT TGAAATCGAA
ATCAACTCAG TCACCGATAA CCCACTAATT GATGTTGATA ACCAAGCTAG CTATCATGGA
GGAAATTTCC TCGGACAGTA CGTGGGTATG GGAATGGATC ACCTGCGTTA CTATATTGGG
TTATTGGCTA AACACCTAGA TGTGCAGATT GCCCTCCTCG CCTCACCAGA GTTTAGCAAT
GGACTACCAC CATCTTTATT AGGCAACCGA GAACGTAAAG TCAATATGGG ACTCAAAGGT
CTGCAAATAT GCGGTAACTC AATTATGCCA CTGTTGACCT TCTATGGAAA TTCCATCGCC
GATCGCTTTC CTACCCATGC AGAACAATTT AATCAGAACA TCAACAGTCA AGGATACACT
TCAGCGACTC TAGCCCGCCG TTCTGTGGAT ATCTTCCAGA ATTATGTGGC GATCGCTCTG
ATGTTTGGAG TCCAAGCTGT TGACCTCCGC ACATATAAAA AGACTGGTCA TTACGATGCA
CGCGCCTGTC TATCACCTGC AACTGAGCGC TTATATTCAG CAGTCCGCCA CGTAGTTGGA
CAAAAACCAA CTTCAGATCG CCCATATATT TGGAATGATA ATGAGCAAGG ACTGGATGAG
CATATTGCCC GGATTTCTGC TGATATCGCT GCTGGTGGTG TGATTGTGCA AGCAGTTCAA
GATATCTTAC CCTGCTTGCA TTAA
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| Protein sequence | MKTLSQAQSK TSSQQFSFTG NSSANVIIGN QKLTINDVAR VARNGTLVSL TNNTDILQGI
QASCDYINNA VESGEPIYGV TSGFGGMANV AISREQASEL QTNLVWFLKT GAGNKLPLAD
VRAAMLLRAN SHMRGASGIR LELIKRMEIF LNAGVTPYVY EFGSIGASGD LVPLSYITGS
LIGLDPSFKV DFNGKEMDAP TALRQLNLSP LTLLPKEGLA MMNGTSVMTG IAANCVYDTQ
ILTAIAMGVH ALDIQALNGT NQSFHPFIHN SKPHPGQLWA ADQMISLLAN SQLVRDELDG
KHDYRDHELI QDRYSLRCLP QYLGPIVDGI SQIAKQIEIE INSVTDNPLI DVDNQASYHG
GNFLGQYVGM GMDHLRYYIG LLAKHLDVQI ALLASPEFSN GLPPSLLGNR ERKVNMGLKG
LQICGNSIMP LLTFYGNSIA DRFPTHAEQF NQNINSQGYT SATLARRSVD IFQNYVAIAL
MFGVQAVDLR TYKKTGHYDA RACLSPATER LYSAVRHVVG QKPTSDRPYI WNDNEQGLDE
HIARISADIA AGGVIVQAVQ DILPCLH
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