Gene Ava_3945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3945 
Symbol 
ID3682990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4895157 
End bp4896443 
Gene Length1287 bp 
Protein Length428 aa 
Translation table11 
GC content38% 
IMG OID637719297 
Producthypothetical protein 
Protein accessionYP_324445 
Protein GI75910149 
COG category 
COG ID 
TIGRFAM ID[TIGR03605] SagB-type dehydrogenase domain 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0479721 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACAAA GTGATATTTT CGGTAAAGCC TATCATGAGG CTACTAAGCA TTCTTACTTG 
TCGGTGCAGC TTGATCCAAA TTATTTAGAT GCCTCAACTC AACCATCGGC ATTTAAATTT
TATCCAAAGT TTTATCGCCG AGTGAAATTA AATCTCGATA ATCCAATTCA CTCTTTTATC
TGGTTAACTA GTGCTGTCAC CTTTGAGAAG GTATATAACA ATGTAGCTTA CAAACTTCGG
GTCAATCCTT CAGCAGGCGC ACTGTATCCC ACTGAGATGT ACGTACAGAT TCGGGGAATG
CCGAAAATAG TAGATGGGAT ATATCATTTA GAAGTTGAGA ATAATTGTCT AACACTCATC
TACGAATTAA TTGATGATGG CTTAGAGAGT TATGTTATAC CGACTAAATG TATCACTGGA
TTCATTTTTT TAATTAGTTC TGTTTATTAT AGGTCTAGCT GGAAATATAA ACAAAGGAGC
TTGAGATATT GCTTATTAGA TAGCGGACAC CATTTAGGTG CTGTTGCTGC TTCAGCGTAT
CTCCATAGCC GTGATATTCA GCTAATTTTT GATTTTGATA AACTCGCTCT CAATACAGAT
TTAGGGTTTG AGAATAAGGA GTTTATTACT GGTTGTGCGA TATCTGGCGA AATACACGAG
AAACAGATTA GAAAATTAAG GCTGAAAGTT CCTTTTGTTT GCGGCACAGA TTACTTTGAA
GCTAATCAAT TTATTGAGGA TAGCTATCAA GCAACATCTG TGCAACCAAG TCACCAGCAA
CAATTACAAC AGCCTTGCTT TGATTTTGAG CAGGATAAAT TCTACCAAAC TGTCTGGAAT
AGACGTTCGA TTAGACGTTT CCGGAAAGAG TTCATTTCGC AAGAACATTA CTTATATGTC
TTGCAACTAC TACAGCAGCC AATCCCGACA GAAAGCGGTG AGGAGATAGA AATCTACTCG
GTAATACATC GAGTTGAGGG GATGAAATCA GGGTTATATA AAGGCGCGAA TTTGGTTAAA
GCAGGTGACT TTAGTGAACA CACTGGTTAC TTGTGTGTGA ATCAAGCTCT TGCCAGAGAT
TGTGCTGTGG TTTTGTTTTT TGTGTCCAAA TACACCAGTT ATCAAACTGC TATGCAAATA
GCTGGTTTTT TAGGACAGAG AATTTATTTG GGTAGTAATT ATGTAGGCAT TCAATGTAGT
GGTATTGGTG CTTTTTATGA TGATGAAACC CAGGAATTCT TAGAAACACA TAAAGATGTG
CTTTATGCAA CGGCAATTGG AACCTGA
 
Protein sequence
MPQSDIFGKA YHEATKHSYL SVQLDPNYLD ASTQPSAFKF YPKFYRRVKL NLDNPIHSFI 
WLTSAVTFEK VYNNVAYKLR VNPSAGALYP TEMYVQIRGM PKIVDGIYHL EVENNCLTLI
YELIDDGLES YVIPTKCITG FIFLISSVYY RSSWKYKQRS LRYCLLDSGH HLGAVAASAY
LHSRDIQLIF DFDKLALNTD LGFENKEFIT GCAISGEIHE KQIRKLRLKV PFVCGTDYFE
ANQFIEDSYQ ATSVQPSHQQ QLQQPCFDFE QDKFYQTVWN RRSIRRFRKE FISQEHYLYV
LQLLQQPIPT ESGEEIEIYS VIHRVEGMKS GLYKGANLVK AGDFSEHTGY LCVNQALARD
CAVVLFFVSK YTSYQTAMQI AGFLGQRIYL GSNYVGIQCS GIGAFYDDET QEFLETHKDV
LYATAIGT