Gene Ava_3943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3943 
Symbol 
ID3682988 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4894000 
End bp4894593 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content41% 
IMG OID637719295 
ProductCBS domain-containing protein 
Protein accessionYP_324443 
Protein GI75910147 
COG category[R] General function prediction only 
COG ID[COG0517] FOG: CBS domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00933631 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGAGCTA AACAAATTAT GACTCAAGAT GTAGCTACTA TTCGCGGTTC TGCGAGTGTA 
GCAGAAGCAG TGAGACTCAT GAGGCTCAAA GGACTGCGTG CTTTGATTGT CGAACCTCGT
CATAGTGCTG ATGCTTACGG TATTGTTACT GTGGCTGATA TTGCAGGTAA GGTGATTGCT
TATGGAAAAG ACTCCGAAAA TGTGCGTATC TATGAAATTA TGAGCAAACC CTGCATCACT
GTCGATCCTG ATCTTGATGT AGAGTATGTA GCTCGTTTAT TGTCAACTAC AAATCTGTGG
TGTGCGCCTG TAATTAAAGG TGAATTACTA GGCGTAATTT CCATTACAGA TATTGTCAGC
AAAGGCGACT GTATTCCTAA ACCAAAATTA ACTTTCTTAC GCAAAGAATT ACACAAAGCT
ATCTCCGATG CGCGAGGAAT TTCTGCTAAC TATGGCTCAG ATTCTAAACG AGCTATTGAG
GCTTGGGATT TAGTGGATGA ACTGGAAGTA GAAGCCTGCT TTTATGGCTT ACCAAAACCA
GACAAATCTG CTAGAGAACT ATTTGCTGAT AAACCAGAGC TAGTTACAGT TTAG
 
Protein sequence
MRAKQIMTQD VATIRGSASV AEAVRLMRLK GLRALIVEPR HSADAYGIVT VADIAGKVIA 
YGKDSENVRI YEIMSKPCIT VDPDLDVEYV ARLLSTTNLW CAPVIKGELL GVISITDIVS
KGDCIPKPKL TFLRKELHKA ISDARGISAN YGSDSKRAIE AWDLVDELEV EACFYGLPKP
DKSARELFAD KPELVTV