Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3943 |
Symbol | |
ID | 3682988 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4894000 |
End bp | 4894593 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637719295 |
Product | CBS domain-containing protein |
Protein accession | YP_324443 |
Protein GI | 75910147 |
COG category | [R] General function prediction only |
COG ID | [COG0517] FOG: CBS domain |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.00933631 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAGAGCTA AACAAATTAT GACTCAAGAT GTAGCTACTA TTCGCGGTTC TGCGAGTGTA GCAGAAGCAG TGAGACTCAT GAGGCTCAAA GGACTGCGTG CTTTGATTGT CGAACCTCGT CATAGTGCTG ATGCTTACGG TATTGTTACT GTGGCTGATA TTGCAGGTAA GGTGATTGCT TATGGAAAAG ACTCCGAAAA TGTGCGTATC TATGAAATTA TGAGCAAACC CTGCATCACT GTCGATCCTG ATCTTGATGT AGAGTATGTA GCTCGTTTAT TGTCAACTAC AAATCTGTGG TGTGCGCCTG TAATTAAAGG TGAATTACTA GGCGTAATTT CCATTACAGA TATTGTCAGC AAAGGCGACT GTATTCCTAA ACCAAAATTA ACTTTCTTAC GCAAAGAATT ACACAAAGCT ATCTCCGATG CGCGAGGAAT TTCTGCTAAC TATGGCTCAG ATTCTAAACG AGCTATTGAG GCTTGGGATT TAGTGGATGA ACTGGAAGTA GAAGCCTGCT TTTATGGCTT ACCAAAACCA GACAAATCTG CTAGAGAACT ATTTGCTGAT AAACCAGAGC TAGTTACAGT TTAG
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Protein sequence | MRAKQIMTQD VATIRGSASV AEAVRLMRLK GLRALIVEPR HSADAYGIVT VADIAGKVIA YGKDSENVRI YEIMSKPCIT VDPDLDVEYV ARLLSTTNLW CAPVIKGELL GVISITDIVS KGDCIPKPKL TFLRKELHKA ISDARGISAN YGSDSKRAIE AWDLVDELEV EACFYGLPKP DKSARELFAD KPELVTV
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