Gene Ava_3905 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3905 
Symbol 
ID3683578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4856590 
End bp4856919 
Gene Length330 bp 
Protein Length109 aa 
Translation table11 
GC content46% 
IMG OID637719257 
Productribulose 1,5-bisphosphate carboxylase small subunit 
Protein accessionYP_324405 
Protein GI75910109 
COG category[C] Energy production and conversion 
COG ID[COG4451] Ribulose bisphosphate carboxylase small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAACCT TACCAAAAGA GCGTCGTTAC GAAACCCTTT CTTACTTACC CCCCCTCACC 
GACGTTCAAA TCGAAAAGCA AGTCCAGTAC ATTTTGAGCC AAGGCTACAT TCCAGCCGTT
GAGTTCAACG AAGCTTCTGA ACCTACCGAA TTTTACTGGA CACTGTGGAA GCTACCTTTG
TTCGGCGCTA AAACATCTCG TGAAGTTTTG GGTGAAGTTC AAGCTTGCCG TTCTCAATAT
CCTGGTCACT ACATCCGTGT TGTAGGATTT GACAACATCA AGCAGTGCCA AGTCCTCAGC
TTCATCGTTC ACAAACCCAG CAGATACTAA
 
Protein sequence
MQTLPKERRY ETLSYLPPLT DVQIEKQVQY ILSQGYIPAV EFNEASEPTE FYWTLWKLPL 
FGAKTSREVL GEVQACRSQY PGHYIRVVGF DNIKQCQVLS FIVHKPSRY