Gene Ava_3870 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3870 
Symbol 
ID3678510 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4824933 
End bp4825346 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content45% 
IMG OID637719222 
Producthypothetical protein 
Protein accessionYP_324370 
Protein GI75910074 
COG category[S] Function unknown 
COG ID[COG3011] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value0.260324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTCAA TAAGTTACTA CGTTGTCTAT GATGGCAATT GTAATCTCTG CGTTACTTTA 
GTCAGATTGC TAGAAACCTT AGACCAAGGC AAGATTTTCC ATTATATCCC CATGCAGGAT
GAGCAGGCGA TCGCTCAATG GGAGATTACG CCCCAAGGTT GTGAACTAGG AGTAATTTTA
ATTGATGCTA AGGAGCCGCA ACGACGTTGG CAAGGAAGTG ATGCAGCCGA AGAAATTGGT
CGTTTATTGC CCCTTGGTAG TATTTTTATC GATGCTTATC GAGCTTTACC GGGGGTGAAA
TGGGTGGGCG ATCGCGTTTA TGCCCAAGTC CGCGATCACC GTTATACTCT GTGTGGTCAG
CGTTCTTGTA CTTACCATTC ACCATATAAA ACTGCTCAAG GGACTTCCAG ATAA
 
Protein sequence
MSSISYYVVY DGNCNLCVTL VRLLETLDQG KIFHYIPMQD EQAIAQWEIT PQGCELGVIL 
IDAKEPQRRW QGSDAAEEIG RLLPLGSIFI DAYRALPGVK WVGDRVYAQV RDHRYTLCGQ
RSCTYHSPYK TAQGTSR