| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3822 |
|---|
| Symbol | |
|---|
| ID | 3678754 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | - |
|---|
| Start bp | 4758903 |
|---|
| End bp | 4759175 |
|---|
| Gene Length | 273 bp |
|---|
| Protein Length | 90 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 637719174 |
|---|
| Product | transglycosylase-associated protein |
|---|
| Protein accession | YP_324322 |
|---|
| Protein GI | 75910026 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2261] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.0470364 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATATTA TTGCATGGGT AGTATTAGGT TTATTAGCTG GTGCGATCGC CAAAGCCATT
TATCCAGGTA CACAAGGCGG TGGTATTCTC TCCACAATGA TTTTGGGTAT CATCGGTGCG
TTTATCGGCG GTAGTTTATA TAGCCTATTC GCAACGGGAA CTTTACAGTT GACAGCCACT
AGTCTGAGTT TTCCTGGCCT GTTAATTGCA GTCCTTGGTG CAATGGTTGC TATTTATTTG
TGGGGACTAC TTAGCAGAAG CAGAAGTGTA TAA
|
|---|
| Protein sequence | MNIIAWVVLG LLAGAIAKAI YPGTQGGGIL STMILGIIGA FIGGSLYSLF ATGTLQLTAT
SLSFPGLLIA VLGAMVAIYL WGLLSRSRSV
|
|---|
| |