Gene Ava_3777 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3777 
Symbol 
ID3678804 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4703164 
End bp4703637 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content36% 
IMG OID637719127 
ProductCheW protein 
Protein accessionYP_324277 
Protein GI75909981 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0835] Chemotaxis signal transduction protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones44 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.149468 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAAAGTC AGCAGAAATT TTTAAGCTTT AATTTGGGAA TCAAAGATAC AGCAGTGATT 
TCCTTACAGC ATATTACAGA AGTTTTACAA GTATCTTTGG TTGATATATG CGGCGTACCC
CAAATGCCAG CTTGTGTTAT GGGTGTATAC AACTGGCGCG GTGAAATGTT GTGGTTAGTA
GATTTAGAAG AAATGCTAGG TTACCCACCA CTATCACATA CAAGCAACTT TCTGGCAAAA
ATGATGGCAA TTGTGTTGGA GGATGATGGT AAGCATTTAG GGATTATAGT CCGGCAAATG
ATGGATATTG AGTTTCTGGA TAATAATCAA ATGAAAGCAC CTGCTGCTGA ATTATTTTCA
TCATCCATTA CTGATTTTTT GCAAGGATAC TTCATTAATC ATGATGAGAA AATGATGTTC
AATTTAGATG CTAGTGCTAT TATTCATTCT CCTATGTGGG TTACTCATAA CTAA
 
Protein sequence
MESQQKFLSF NLGIKDTAVI SLQHITEVLQ VSLVDICGVP QMPACVMGVY NWRGEMLWLV 
DLEEMLGYPP LSHTSNFLAK MMAIVLEDDG KHLGIIVRQM MDIEFLDNNQ MKAPAAELFS
SSITDFLQGY FINHDEKMMF NLDASAIIHS PMWVTHN