| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3687 |
|---|
| Symbol | |
|---|
| ID | 3679106 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4595260 |
|---|
| End bp | 4596027 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637719038 |
|---|
| Product | fimbrial assembly |
|---|
| Protein accession | YP_324188 |
|---|
| Protein GI | 75909892 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3166] Tfp pilus assembly protein PilN |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 38 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTATGGAT TAGATATTAA TTTTCTCAAA GACCGCCCAG CTTACCAGTC AAATAACAAG
TCCGAGAAAA AACCGGGTAT TAAATTGCCA TCTGGGAGCT TATTACCCAT GTATTTGGGC
GTTGGCGTAG GTCTTTGTTT TCCGATATTT GTCGGTGGTG GGTTGTTATT TTTACAGGCG
AAAACTGCGG AATTAGAGCA GGCGATCGCC CTACTGGATG AAGAAAGTAA GAAGCTGGAT
GCAGAAATCG CCAGCATTAC CAAAATCAAG GAACAGACTG GCGCTGTCAA AGCCGACACC
CAAAGTTTGG TGATGGTGTT TGACCAGATT CGTCCTTGGT CAGCAATGTT AGAAGATTTG
CGCGATCGCA TTCCCGCAAG TGTGCAGATT GAAACCGTTA GACAAACACC ACCTACACCC
CCAGCCGCAG GACAGCCTGC TGGTAATCCA GCCGGTGGGA TAGAAATTAC TGGCTTGGCT
CGTTCCTTTA ACGATGTCAA TGACTTCTTA TTACTCTTAC AGCAATCCCG TTTTTTGAAG
TCTGCTGACA GCAAAATTAT CACAGCCAGC CTAGTAGATG CACCAGTACA AACTGGTGGT
AGCAACAGTG CGGGAATTAA ACCACCCCAA GTAGTTAAAT ACACTATTCA ATCCAGCCTC
AGTGATGTTC CAGCCTCTGA ATTAATTCGG GAGTTAGAAC AAAAAGGCAC TGTCGGACTG
GTGACTCGGA TTCGAGCTAT GCAACAAACA GGAGTCATTA CAAGATGA
|
|---|
| Protein sequence | MYGLDINFLK DRPAYQSNNK SEKKPGIKLP SGSLLPMYLG VGVGLCFPIF VGGGLLFLQA
KTAELEQAIA LLDEESKKLD AEIASITKIK EQTGAVKADT QSLVMVFDQI RPWSAMLEDL
RDRIPASVQI ETVRQTPPTP PAAGQPAGNP AGGIEITGLA RSFNDVNDFL LLLQQSRFLK
SADSKIITAS LVDAPVQTGG SNSAGIKPPQ VVKYTIQSSL SDVPASELIR ELEQKGTVGL
VTRIRAMQQT GVITR
|
|---|
| |