| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ava_3591 |
|---|
| Symbol | uvrA |
|---|
| ID | 3679361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Anabaena variabilis ATCC 29413 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007413 |
|---|
| Strand | + |
|---|
| Start bp | 4472899 |
|---|
| End bp | 4475796 |
|---|
| Gene Length | 2898 bp |
|---|
| Protein Length | 965 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637718942 |
|---|
| Product | excinuclease ABC subunit A |
|---|
| Protein accession | YP_324092 |
|---|
| Protein GI | 75909796 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG0178] Excinuclease ATPase subunit |
|---|
| TIGRFAM ID | [TIGR00630] excinuclease ABC, A subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.240208 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0431372 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGATA ATAAGCTAGC CGCATCCCTG AATGGACATC TTCCCTACGC CAATCACAAC
AGCCAGAATA CCATTAGAAT TCGGGGTGCG CGACAGCATA ATCTGAAGAA TATTGACTTG
GAATTGCCAC GCGATCGCCT AATCGTGTTT ACTGGCGTAT CAGGTTCGGG TAAGTCTTCT
TTGGCGTTTG ATACCATCTT CGCCGAAGGT CAACGGCGCT ATGTGGAATC TCTCAGCGCC
TACGCCAGAC AATTTTTAGG ACAATTAGAT AAACCGGATG TGGAAGCCAT CGAAGGTTTA
AGCCCAGCGA TTTCCATTGA CCAAAAATCT ACATCTCACA ACCCCCGTTC TACTGTGGGG
ACGGTAACAG AAATTTACGA CTATTTGCGA CTGTTGTTTG GTCGCGCTGG TGAACCCCAT
TGTCCCATCT GCGATCGCTG TATTGCACCC CAAACCATTG ATGAGATGGT TGATAGGATT
ATGGAACTAC CAGACAGGAC TCGCTTCCAA ATTCTCGCGC CTGTTGTTAG GGGTAAGAAA
GGAACTCACC GCAAATTATT ATCTAGTTTG GCTTCCCAAG GCTTTGTTCG GGTGCGGGTT
GATGGCGAAG TCCGCGAACT TTCCGACTCG ATTGAATTAG ATAAAAATAT TACTCATACC
ATTGAGGTTG TCATTGACCG ACTGGTAAAA AAAGACGGTA TTCAAGAACG TTTAGTAGAT
TCTTTGTCTA CGTGTCTCAA ACAAGCTGGT GGTATTGCTA ACATATTAAT CAGTAATTCA
TCAACAACGG ACAACGGACA AGAGACAACT GACGATGAAG AATTAGTATT TTCGGAAAAC
TTTGCTTGTC CTGAACATGG CGCAGTTATG GAGGAGTTAT CACCGCGTTT GTTCTCCTTT
AACTCCCCCT ATGGTGCTTG TCCCAACTGT CACGGTCTTG GCACTTTACG CAGATTTTCA
CCAGAGTTAG TCGTACCTGA CCCTGAGGCT CCAGTATATG CAGCGATCGC TCCTTGGTCA
GAAAAAGAAA ATTCCTATTA CCTGGAACTA CTATATAGCT TGGGACAAAC TCATAATTTT
GAGTTGCAAA TAAATTGGCA TAAACTCACC CCAGAACAAC AGCAAATTAT TTTGTATGGG
GAGAAACAGG AAGGTAAAGA TAATCCTAAG ACACCAAGTT TTAAAGGTGT ATTGCCAATT
TTACAACGCC AATATGAAGG CGGTTCCGAA TTAATTAAGC AGAAATTAGA GCAGTATTTA
ATTGACCAAC CATGTGAAGT TTGTCACGGC AAACGGTTAA AACCAGAAGC CTTGGCGGTG
AAGTTGGGAC AATATAATAT CTTAGATTTA ACTGGAGTTT CGATTCGGGA TTGCCGAGAG
AGAACAGAAC AATTAAAATT AAGCGATCGG CAGATGCAAA TTGCTGATTT AGTCTTGCGA
GAAGTTAAAG CTAGATTACA ATTTTTGTTA GATGTCGGCT TAGATTACCT CACCCTAGAC
CGTGCCGCCA TGACCCTCTC TGGAGGGGAA GCCCAACGCA TTCGCCTCGC TACACAAATT
GGCTCTGGCT TAACAGGTGT TCTCTATGTT TTAGATGAAC CAAGCATTGG TTTACACCAA
AGAGATAACG CAAGATTACT CAAAACTTTA ACTAAATTAA GGGATTTAGG TAATACCTTA
ATTGTAGTCG AACACGACGA AGAAACAATC CGCGCTGCGG ACTATCTAGT TGATATTGGG
CCAGGTGCGG GTATCCACGG CGGTAATATT ATTTCTCAAG GCGATTTGCA AGCTTTATTA
ACAGCAGAAG AGTCTCTTAC TGGTGCATAT TTATCAGGAC GTAAGGTCAT TAATACACCA
GGAGAACGCC GTGAAGGAAA TGGTCGGAGT TTAACCATTA AAAATGCCCA TCGCAATAAT
TTAAGAAATA TTGATGTAGA AATTCCTTTA GGTAAATTAG TTGCTGTCAC GGGAGTATCT
GGTTCTGGTA AATCGACATT AATTAACGAA TTACTTTACC CATCACTACA ACATCATCTA
ACTAAAAAAG TTCCTTTACC TAAAGAGTTA GAAAAAATTC AGGGGTTGAG TGCAGTAGAT
AAAGCGATCG TCATCGACCA ATCACCCATC GGACGCACAC CACGTTCTAA CCCCGCAACT
TACACAGGAG TTTTTGACGT AATTCGGGAC GTATTTTCAC AAACAGTAGA AGCAAAAGCC
AGAGGTTACA AACCCGGACA ATTTTCTTTC AACGTTAAAG GTGGACGTTG TGAAGCCTGT
AGCGGACAGG GTGTAAATGT CATTGAGATG AACTTTCTTC CTGATGTTTA TGTGCAGTGT
GAAATTTGCA AAGGTGCAAG ATACAACCGC GAAACGTTGC AAGTGAAATA TAAAGATAAA
TCTATTTCCG ATGTTCTCAA CATGACTGTT GAGGAGAGTT TAGATTTCTT CCAAAACATC
CCCAAAGCTG CTACAAGATT GCAAACTTTA GTTGATGTTG GATTAGGCTA TGTTCAACTA
GGACAGCCTG CAACTACCTT ATCTGGTGGT GAAGCGCAAA GAGTCAAATT AGCCACAGAA
TTATCTCGCC GCGCTACAGG TAAGACCCTG TATTTAATCG ATGAACCCAC CACCGGCTTA
TCTTTTTATG ATGTCCACAA ATTACTAGAT GTGTTGCAAA GATTGGTCGA TAAAGGTAAT
TCGATTTTGG TAATTGAACA CAACTTAGAT GTAATTCGTT GTGCTGATTG GGTCATTGAT
TTAGGGCCAG AAGGTGGCGA CAAGGGGGGA GAAGTGATTG CTGTCGGGAC ACCAGAGGAA
GTTGCTAAAA ATACCAGTTC TTATACTGGG CAATATTTGC AGCAGGTATT GCAACAATAT
CCTGCATTAA AAGATTAA
|
|---|
| Protein sequence | MSDNKLAASL NGHLPYANHN SQNTIRIRGA RQHNLKNIDL ELPRDRLIVF TGVSGSGKSS
LAFDTIFAEG QRRYVESLSA YARQFLGQLD KPDVEAIEGL SPAISIDQKS TSHNPRSTVG
TVTEIYDYLR LLFGRAGEPH CPICDRCIAP QTIDEMVDRI MELPDRTRFQ ILAPVVRGKK
GTHRKLLSSL ASQGFVRVRV DGEVRELSDS IELDKNITHT IEVVIDRLVK KDGIQERLVD
SLSTCLKQAG GIANILISNS STTDNGQETT DDEELVFSEN FACPEHGAVM EELSPRLFSF
NSPYGACPNC HGLGTLRRFS PELVVPDPEA PVYAAIAPWS EKENSYYLEL LYSLGQTHNF
ELQINWHKLT PEQQQIILYG EKQEGKDNPK TPSFKGVLPI LQRQYEGGSE LIKQKLEQYL
IDQPCEVCHG KRLKPEALAV KLGQYNILDL TGVSIRDCRE RTEQLKLSDR QMQIADLVLR
EVKARLQFLL DVGLDYLTLD RAAMTLSGGE AQRIRLATQI GSGLTGVLYV LDEPSIGLHQ
RDNARLLKTL TKLRDLGNTL IVVEHDEETI RAADYLVDIG PGAGIHGGNI ISQGDLQALL
TAEESLTGAY LSGRKVINTP GERREGNGRS LTIKNAHRNN LRNIDVEIPL GKLVAVTGVS
GSGKSTLINE LLYPSLQHHL TKKVPLPKEL EKIQGLSAVD KAIVIDQSPI GRTPRSNPAT
YTGVFDVIRD VFSQTVEAKA RGYKPGQFSF NVKGGRCEAC SGQGVNVIEM NFLPDVYVQC
EICKGARYNR ETLQVKYKDK SISDVLNMTV EESLDFFQNI PKAATRLQTL VDVGLGYVQL
GQPATTLSGG EAQRVKLATE LSRRATGKTL YLIDEPTTGL SFYDVHKLLD VLQRLVDKGN
SILVIEHNLD VIRCADWVID LGPEGGDKGG EVIAVGTPEE VAKNTSSYTG QYLQQVLQQY
PALKD
|
|---|
| |