Gene Ava_3582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3582 
Symbol 
ID3679352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4460960 
End bp4461478 
Gene Length519 bp 
Protein Length172 aa 
Translation table11 
GC content42% 
IMG OID637718933 
Productphosphoribosyltransferase 
Protein accessionYP_324083 
Protein GI75909787 
COG category[R] General function prediction only 
COG ID[COG2236] Predicted phosphoribosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones40 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00933631 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCAGACC TTTACGTTTC TTGGTCAGAG TATCACTATA AAATTGAGCA ACTGGCTGCT 
CATATTTATC AATCTGGCTG GGAATTCAAT CAGATTGTCT GTTTAGCCAG GGGTGGACTA
CGAGTGGGAG ATATCATTTC CCGTATCTAT CACAAACCCC TAGCAATTTT AGCTACATCT
TCTTATAGTG GCGCAGGTAA GCAAGAAAGA GGTTATTTAA CTGTTTCTCG TCATCTGACA
ATGACAACCG AAAGTTTAGG CTCACACATT CTCCTAATCG ATGACTTAGT AGACTCTGGA
ATCACGCTCC AAGAAACCAT CCCTTGGCTA AAACAATATA GTGATTCCCC GATTGAGGAA
ATCCGCACAG CTGTAGTTTG GTATAAAGCT TGTTCAGCAA TAGCACCTAA TTACTACGTC
GATTACTTAC CTGACAATCC TTGGATTCAT CAGCCCTTTG AACATTATGA GCATATCAAT
CCCGCAGATT TGGCGGCTAG GGTGGGTCAG TATTGTTGA
 
Protein sequence
MPDLYVSWSE YHYKIEQLAA HIYQSGWEFN QIVCLARGGL RVGDIISRIY HKPLAILATS 
SYSGAGKQER GYLTVSRHLT MTTESLGSHI LLIDDLVDSG ITLQETIPWL KQYSDSPIEE
IRTAVVWYKA CSAIAPNYYV DYLPDNPWIH QPFEHYEHIN PADLAARVGQ YC