Gene Ava_3558 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3558 
Symbol 
ID3679582 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4430418 
End bp4431629 
Gene Length1212 bp 
Protein Length403 aa 
Translation table11 
GC content46% 
IMG OID637718909 
Productprecorrin-6Y C5,15-methyltransferase (decarboxylating) 
Protein accessionYP_324059 
Protein GI75909763 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2241] Precorrin-6B methylase 1
[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCAGA AATGGCTATC TATTATCGGT ATTGGTGAAG ATGGACTATC GGGGTTAAGT 
GCGATCGCTC TTTCTCTACT CAATCAAGCA GAAATCGTTG TAGGAGGCGA TCGCCATTTA
GCAATGTTAC CTCCAAACGA CCCACGCGAA AAAATTCTTT GGACTTCTCC TATTACTACC
GCAGTAGCAG AAATTATCCA GCGTCGGGGT AAATCTGTAT GTGTGTTAGC TAGTGGTGAC
CCCATGTATT ACGGTATTGG TGTCACCTTG GCGCGACAAG TTCCCATATC GGAAATGACG
ATTATCCCTG CACCTTCATC TTTCAGCCTC GCTTGCGCCC GATTAGGATG GTCTTTAACA
GAGGTAGAAA CCTTAAGTTT ATGCGGTCGT CCCTCTGCTT TGCTGCAATC TTATATATAT
CCTGGTGCGC GGTTATTAAT TTTAAGTGAG GGGAAAAATA CACCGAGCAT TGTTGCCGAA
ATTCTTACAC AGGGAGGTTT TGGGAATAGC CAACTCACAG TCTTGGAACG GATGGGTGGC
ATTCATGAAA GGATATTAAC AGGGACAGCC GCAACCTGGC AGGAAACGAA ACTGGCAGAC
TTAAATGCGA TCGCCCTACA TTGTATCGCT GATGCTGGTG TTGTTACCTT ACCCAGATTA
CCAGGATTGC CAGATAACGC CTATCACCAC GATGGACAAC TTACCAAACG GGAAGTTAGA
GCTGTTACCC TATCAACTTT AGCACCTACA CCAGGACAGT TACTTTGGGA TGTGGGGGCG
GGTTGTGGTT CCATATCGAT AGAATGGATG CGGACTAATC CCAGATGTCA GGCGATCGCT
ATTGAACAAA ACTCATCTAG ACTACAATAC ATTGCAGATA ATGCGGCTGC TTTAGGTACT
CCCAACCTGA AAATCATTGC GGGAAAAGCA CCTCATGTCC TCCAAGATTT ACCCACACCC
GATGCCATTT TTATCGGTGG TGGAGTTACA GCCCCAGGAT TATTTGATAT TTGTTGGCAA
GCATTACGCC CAGGCGGCAG GTTAATTGCT AATGTAGTCA CCATAGAAGG CGAGCAGACC
TTATTTCAAT GGTACGAAAA AGTGGGTGGC AGTTTTACCC GTATTGCCAT TCAACGAGCC
GAACCAATTG GTAAATTTTT GGGTTGGCGA GCAATGGCTC CTGTAACACA ATGGGTAGGG
GTGAAAGATT AA
 
Protein sequence
MTQKWLSIIG IGEDGLSGLS AIALSLLNQA EIVVGGDRHL AMLPPNDPRE KILWTSPITT 
AVAEIIQRRG KSVCVLASGD PMYYGIGVTL ARQVPISEMT IIPAPSSFSL ACARLGWSLT
EVETLSLCGR PSALLQSYIY PGARLLILSE GKNTPSIVAE ILTQGGFGNS QLTVLERMGG
IHERILTGTA ATWQETKLAD LNAIALHCIA DAGVVTLPRL PGLPDNAYHH DGQLTKREVR
AVTLSTLAPT PGQLLWDVGA GCGSISIEWM RTNPRCQAIA IEQNSSRLQY IADNAAALGT
PNLKIIAGKA PHVLQDLPTP DAIFIGGGVT APGLFDICWQ ALRPGGRLIA NVVTIEGEQT
LFQWYEKVGG SFTRIAIQRA EPIGKFLGWR AMAPVTQWVG VKD