Gene Ava_3500 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3500 
Symbol 
ID3679773 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4341373 
End bp4341618 
Gene Length246 bp 
Protein Length81 aa 
Translation table11 
GC content40% 
IMG OID637718852 
Producthypothetical protein 
Protein accessionYP_324002 
Protein GI75909706 
COG category[S] Function unknown 
COG ID[COG2886] Uncharacterized small protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.126355 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGTCA CAATTCCCGA TGATATCCTC AGAGCATCAA ACATGACAGA GGATGAACTG 
AAATTAGAAA TTGCTATCTT GCTTTACCAG CAAGGTAAAA TTAGCAGTGG CAAAGTCCGA
GCATGGACAG GAATCACAGT CCTGGAATTT CAGCATGAAT TAGCCAAACG AGGTTTACAC
ATTAACTATG ATGTTGAAGA TTTCCAATCT GATATAAAGA CACTGCAATC AATGGGTTTG
CTGTGA
 
Protein sequence
MSVTIPDDIL RASNMTEDEL KLEIAILLYQ QGKISSGKVR AWTGITVLEF QHELAKRGLH 
INYDVEDFQS DIKTLQSMGL L