Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3421 |
Symbol | |
ID | 3679947 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4251795 |
End bp | 4252619 |
Gene Length | 825 bp |
Protein Length | 274 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 637718773 |
Product | condensin subunit ScpA |
Protein accession | YP_323923 |
Protein GI | 75909627 |
COG category | [S] Function unknown |
COG ID | [COG1354] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCTT CCGAGCTATT AGAAACGATC ACTCTCTTAA TTGAGCAAGC AGAACAAGGA GAAATAGATC CTTGGGATGT CAAAGTTATT GAGGTGATTG ACCGTTATTT AGAACTAATG ACACCAAAGA CCACTGCCAG AGGTTATGAA TCTGACTTGT CTCAATCTGG ACAGGCTTTT TTATCAGCCT CTATGCTGGT ATTATTCAAG GCCAATACCT TGATGCAATT ATCAACAGCA GAAGATTTAG AAGATATTGA GGATAGTCTA TTAGCAGAGA ATGGAGATAG CTTATTCCAT CAAACCCATC GTTTACCCTT AGAGCGAGTT TTACGACGGC GACCCGCCGC CATGCCCCCA CCAAAACGCC GTGTCACTTT GCAAGAGTTG ATCGCCCAAT TGCAAATCAT GGCGAACCAA CTCAAACTAG TACAAAAAGT TAGTAAACCG GAACGTCCCA AACGTCAACC TACTGTCAAA GCTATGCGGG AAGCGCTAGA GTTAGCGCAC CAAGAAAATT TGACGGAGGT AGCTGGTGAA TTGGAACAAG TATTGCATTT TTCGGCCCAA GAACTGTTGT TAGAACAAAA TTATTTAAAT TTAGAACAAC TCGTACAATT GTGGACTCAG ACAAAGCAAT CACACCAATT ATCAGCCCAT GAATCGGTAA ACAGTGACCT AGTTAGCGTG TTCTGGGCTT TATTGCTATT ATCGGCACAA TCTAAGGTAG AGCTAGTTCA GGAGGAATTT TATCAAGAGG TGAGAATCCG CTTGCTTTCA GATTCAGTAA ACACCTACCA ATCATTGGAG CAACCAATAA ACTGA
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Protein sequence | MDASELLETI TLLIEQAEQG EIDPWDVKVI EVIDRYLELM TPKTTARGYE SDLSQSGQAF LSASMLVLFK ANTLMQLSTA EDLEDIEDSL LAENGDSLFH QTHRLPLERV LRRRPAAMPP PKRRVTLQEL IAQLQIMANQ LKLVQKVSKP ERPKRQPTVK AMREALELAH QENLTEVAGE LEQVLHFSAQ ELLLEQNYLN LEQLVQLWTQ TKQSHQLSAH ESVNSDLVSV FWALLLLSAQ SKVELVQEEF YQEVRIRLLS DSVNTYQSLE QPIN
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