Gene Ava_3410 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3410 
Symbol 
ID3679935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4235012 
End bp4236307 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content47% 
IMG OID637718761 
Productadenylosuccinate lyase 
Protein accessionYP_323912 
Protein GI75909616 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0015] Adenylosuccinate lyase 
TIGRFAM ID[TIGR00928] adenylosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000391938 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATAGAGC GTTATACTCT GCCCGAAATG GGCAACCTGT GGACTGACTT TTATAAACTA 
AAAACCTGGC TTCAGGTGGA AATTGCAGTC TGTGAAGCCC AAGCGGAATT GGGTTATATT
CCATCTGCTG CTGTTGAGGA AATCAAAGCT AAGGCAAATT TTGATCCGCA ACGGGTACTG
GAAATAGAGG CGGAAGTCCG TCACGATGTC ATCGCCTTTT TGACTAATGT CAATGAGTAT
GTGGGTGATG CTGGACGTTA CATTCACTTG GGCTTAACTA GCTCTGATGT ATTAGATACA
GCTTTAGCTT TACAACTGGT TGCTAGTTTG GATGTGTTGG CGCAACGCCT GGAAGGCTTG
ATTGGGGTGA TTCGCCAAAA GGCACGGGAA CACCGTTACA CGGTAATGGC TGGCCGATCG
CATGGTATTC ACGCTGAACC AATTACTTTT GGGTTTAAAT TGGCTGGTTG GTTGGCGGAA
GTGTTACGCC ACCAACAACG GCTGACAATT TTGCGGGAAA CGATCGCCGT GGGTAAGATT
TCTGGCGCGG TGGGAACCTA CGCTAATATT GAACCACGGG TGGAGGCGAT CGCTTGTCAA
AAACTCGGAC TCAAACCCGA TACAGCTTCT ACACAAGTCA TTTCCCGCGA TATTCATGCT
GATTTTGTGC AGCAGTTAGC CTTGATTGCT GCCTCTATTG AACGCTTTGC TGTAGAAATT
CGCAATCTAC AAAAAACAGA CGTTCTGGAA GTAGAGGAAT TTTTCTCGAA GGGACAAAAA
GGCTCTAGTG CGATGCCACA TAAACGCAAC CCCATCCGTT CGGAACGGCT GACGGGGATG
GCGCGGCTAG TGAGGAGTCA TGCCGGCGCA GTGTTAGAGG ATGTTGCCCT GTGGCACGAA
CGGGACATTT CCCATAGTTC AGTGGAACGA GTAGTTCTGC CAGATGCCTG CATTTTGACC
CACTTTATGC TGATAGAAAT CACCAATTTG GTGGAAAATC TGTTAGTCTA CCCAGAAAAT
ATGGCGCGGA ATCTCAACTG CTATGGTGGC GTTGTGTTCA GCCAAAAAGT TTTGCTGGCA
TTGGTAGATA AAGGACTCAG CCGAGAAGAA GCTTATGCGA TCGTTCAGCA AAATGCTCAT
ACTGCCTGGA ATAAGCCGGA AGGCAATTTC CATGACTTGA TCATTAACGA CTCCCGTGTC
ACTCAACATT TGTCTCCAGC AGAAATTGCT GTGTGTTTTG ACCCACAGCA ACATCTCAAG
CATTTGGATG AGGTTTATCG CCGGTTGGAT ATTTAG
 
Protein sequence
MIERYTLPEM GNLWTDFYKL KTWLQVEIAV CEAQAELGYI PSAAVEEIKA KANFDPQRVL 
EIEAEVRHDV IAFLTNVNEY VGDAGRYIHL GLTSSDVLDT ALALQLVASL DVLAQRLEGL
IGVIRQKARE HRYTVMAGRS HGIHAEPITF GFKLAGWLAE VLRHQQRLTI LRETIAVGKI
SGAVGTYANI EPRVEAIACQ KLGLKPDTAS TQVISRDIHA DFVQQLALIA ASIERFAVEI
RNLQKTDVLE VEEFFSKGQK GSSAMPHKRN PIRSERLTGM ARLVRSHAGA VLEDVALWHE
RDISHSSVER VVLPDACILT HFMLIEITNL VENLLVYPEN MARNLNCYGG VVFSQKVLLA
LVDKGLSREE AYAIVQQNAH TAWNKPEGNF HDLIINDSRV TQHLSPAEIA VCFDPQQHLK
HLDEVYRRLD I