Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3393 |
Symbol | |
ID | 3680054 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4220633 |
End bp | 4222312 |
Gene Length | 1680 bp |
Protein Length | 559 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 637718743 |
Product | transglutaminase-like |
Protein accession | YP_323895 |
Protein GI | 75909599 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1305] Transglutaminase-like enzymes, putative cysteine proteases |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTTAATA TGAGTTTTGC ACCCACCAGT TTGACAGTTA GCCAAATGTC AGGGACAAGG ACAATTAGAC CATTGACTGC TGCTACTTTA TGTGGCATTG CTTTTATCCA AGATAGACTG ATCGCCATTG ACAGTATCAA GGGACATTTA CTAGAAATTG ACCCCAAAAC CGATAACAGC AAGATTCTCA ATCCTCACCA AGCCAAAGAG TTTACGGACG TAACCGGGTT AGCTGTTTGG GAGGACGAGC TGTGGGTAAC TCGCGGTAAC AGTGTGTATG TATCTAAGCT CTCATCTTTA GGCTTGGAAC ATTTTGTCAC GTTACCTTAT AGCGCGGACG GTGTTGCCGT TTGGCAATCA ACAGTTTACG TTAGTTGCCA TAGATTAGGC TACATCCTGA TTTTTGACCG CGATACCCGT AAAGAGATTA CCAGATTTTA TGCTCCTGGG GTTGGGATCG AAAATTTAGC GGTGAATGGC AATACCCTGT GGGTATGCGA TCGCACCGAA CAAACAGTCT ACTCTATGGA TAGGGCAACT GGGGAGGTAA AATTCAGTGT TTTAACCCCC TTTGAATCAC CTACAGGCAT AGCATTAAAC GTAGATGCCG AAACGGGTAA AGAAAATCTT TATGTTGCCT ATGCCTCGGA GGAACCCTAT ATCCGGGATA ATCCTAATGC TGATCCTAAT CATGAATTAA CGTACCGCGA TCGCACTTTT ATTCACCCCC TCTACTATCA TCACGAGCCA GATAAACACT ACGCCCTTTC TAACGGTTAT CTCATCGAAA TGTCCTATGC TGAGGAAATT TCGCCTTTAG AAGAGGTGTA TATACCAGAA GTAGAATGGC GGATTGCTCT CCCCTCAGAA ACTGAACGCC AAAAAATTCG ACACATTGAA CCCATCGGTA TACCTTTCAC AGAAGAAGTC ATTGACGGAC AACGTGTCGC CGTATTTAAA TTTGATGCCC TAGTTCCTGG TGAACGCCAT ATCTTTGGCT GGAAAGCATT ATTAGAAGTG CGAGGCATTA AGTATCGCAT TACACCCAAA GAAGTAGAGA ATATTCCTGA ACTATCACCG GAATTTCAAG AGCGCTACTT AGTGGATGAC GACGATTTAG CAATGGACAC CAGTATAGTC CGCCGTGCGG CTGAAGAAGC TGTTGGCTCA GAAACGAATC TGTTGCGGAA AATGTACAGC ATTCGTAATT ATGTTTATGA TGAGTTGTCC TATGGTATCA AGCCATACAT AGACACGCCA GATATCGTTT TAGAGCGAGG CGTTGGTTCC TGTGGCGAAT ATGTGGGAGT GTTACTCGCT CTTTGCCGTT TGAATGGTAT TCCTTGCCGC ACAGTGGGTA GGTACAAATG CCCCCCACAC GCCGAACAGC AAGGAGTTCC CCTGCAACCA GATTTTAATC ATGTGTGGTT AGAATTTTAC ATTCCTGGCT TTGGCTGGTT GCCAATGGAA TCAAACCCTG ATGACTTGGG CCGTGGTAGT CAATATCCTA CCCGCTTTTT TATGGGCTTA TGCTGGTATC ACATTGAAAT CGGTAAAGGT GTTTCCTTTG AAACTATCAG TAGTCAAGGT AAGAGATTAA CCAAGGATGA TATCCCCATA GGTGATTTGG CAATTAATCA CATTCGGTTT ACGATTGTCA AGGAATTACC AGATTTTTGA
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Protein sequence | MLNMSFAPTS LTVSQMSGTR TIRPLTAATL CGIAFIQDRL IAIDSIKGHL LEIDPKTDNS KILNPHQAKE FTDVTGLAVW EDELWVTRGN SVYVSKLSSL GLEHFVTLPY SADGVAVWQS TVYVSCHRLG YILIFDRDTR KEITRFYAPG VGIENLAVNG NTLWVCDRTE QTVYSMDRAT GEVKFSVLTP FESPTGIALN VDAETGKENL YVAYASEEPY IRDNPNADPN HELTYRDRTF IHPLYYHHEP DKHYALSNGY LIEMSYAEEI SPLEEVYIPE VEWRIALPSE TERQKIRHIE PIGIPFTEEV IDGQRVAVFK FDALVPGERH IFGWKALLEV RGIKYRITPK EVENIPELSP EFQERYLVDD DDLAMDTSIV RRAAEEAVGS ETNLLRKMYS IRNYVYDELS YGIKPYIDTP DIVLERGVGS CGEYVGVLLA LCRLNGIPCR TVGRYKCPPH AEQQGVPLQP DFNHVWLEFY IPGFGWLPME SNPDDLGRGS QYPTRFFMGL CWYHIEIGKG VSFETISSQG KRLTKDDIPI GDLAINHIRF TIVKELPDF
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