Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ava_3387 |
Symbol | |
ID | 3680087 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Anabaena variabilis ATCC 29413 |
Kingdom | Bacteria |
Replicon accession | NC_007413 |
Strand | + |
Start bp | 4211081 |
End bp | 4211842 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 637718737 |
Product | hypothetical protein |
Protein accession | YP_323889 |
Protein GI | 75909593 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 37 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATTCTTA AAAAACTTGT TTGTGCCACA TTACTCTCGA CATCAGCAAT CACTTCATTC ATCTATGCTG GCTCTGCTCA TGCTATTGGC TTCAAGGTAG AAACAGGTGT TGCTGGTCCT AATGGTGTTA CCAATCAAGG TGCTTATTCT CAGTTTTGGC AAGATTCAGG TGTAACAACT ATTGATTTCA ACAATGGTGT AGCACCAACC ACAGGTTTTG CTAAATATTC ATTTGAAAAT GGCGGAAGTA GTAGTGTAAG AAAAGACCAA TGGGCCCCAG CAGGGCCAAA CGGAGAAGTA AATGATACAA GCTACTTGGC TGTTTTCAAT GGTGATAAAG TGACCATTAA CTTAGATAGC TATCTAAATT ATTTTGGTAT TGACTGGGGT GCGATCAGTA ACAATAATAC CTTCTCTTTT TATAATGGTG ACACTCTGAT AAAGTCTTTT ACTACTCAAG ATGTTAATAC CGTAGCTCCT ATTAGTGCTG CACAGCACGG TGGAGAACGT AATGGCTACC TTCATTTCTA TGCTGAAAGC CGTAATGATC TTTTCAACAA GATTGTCATC TCTCAAGCTA GTACTGATGG TGGTGGGTTT GAAAGTGACA ACCACTCTTT TAAGATTGGA AATGGCAGAT TTAAAGGTTT TGATCCCCAA TCTGTTCCTG AACCTGGTAT GACTTTAGGG ATGCTAGCTG TTGGTGGTTT GTTCTTACGT CAACACAAAA AGCAAAAATT GCAAAGTGCT AGCAAATCTT AA
|
Protein sequence | MILKKLVCAT LLSTSAITSF IYAGSAHAIG FKVETGVAGP NGVTNQGAYS QFWQDSGVTT IDFNNGVAPT TGFAKYSFEN GGSSSVRKDQ WAPAGPNGEV NDTSYLAVFN GDKVTINLDS YLNYFGIDWG AISNNNTFSF YNGDTLIKSF TTQDVNTVAP ISAAQHGGER NGYLHFYAES RNDLFNKIVI SQASTDGGGF ESDNHSFKIG NGRFKGFDPQ SVPEPGMTLG MLAVGGLFLR QHKKQKLQSA SKS
|
| |