Gene Ava_3387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3387 
Symbol 
ID3680087 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4211081 
End bp4211842 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content39% 
IMG OID637718737 
Producthypothetical protein 
Protein accessionYP_323889 
Protein GI75909593 
COG category 
COG ID 
TIGRFAM ID[TIGR02595] PEP-CTERM putative exosortase interaction domain 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCTTA AAAAACTTGT TTGTGCCACA TTACTCTCGA CATCAGCAAT CACTTCATTC 
ATCTATGCTG GCTCTGCTCA TGCTATTGGC TTCAAGGTAG AAACAGGTGT TGCTGGTCCT
AATGGTGTTA CCAATCAAGG TGCTTATTCT CAGTTTTGGC AAGATTCAGG TGTAACAACT
ATTGATTTCA ACAATGGTGT AGCACCAACC ACAGGTTTTG CTAAATATTC ATTTGAAAAT
GGCGGAAGTA GTAGTGTAAG AAAAGACCAA TGGGCCCCAG CAGGGCCAAA CGGAGAAGTA
AATGATACAA GCTACTTGGC TGTTTTCAAT GGTGATAAAG TGACCATTAA CTTAGATAGC
TATCTAAATT ATTTTGGTAT TGACTGGGGT GCGATCAGTA ACAATAATAC CTTCTCTTTT
TATAATGGTG ACACTCTGAT AAAGTCTTTT ACTACTCAAG ATGTTAATAC CGTAGCTCCT
ATTAGTGCTG CACAGCACGG TGGAGAACGT AATGGCTACC TTCATTTCTA TGCTGAAAGC
CGTAATGATC TTTTCAACAA GATTGTCATC TCTCAAGCTA GTACTGATGG TGGTGGGTTT
GAAAGTGACA ACCACTCTTT TAAGATTGGA AATGGCAGAT TTAAAGGTTT TGATCCCCAA
TCTGTTCCTG AACCTGGTAT GACTTTAGGG ATGCTAGCTG TTGGTGGTTT GTTCTTACGT
CAACACAAAA AGCAAAAATT GCAAAGTGCT AGCAAATCTT AA
 
Protein sequence
MILKKLVCAT LLSTSAITSF IYAGSAHAIG FKVETGVAGP NGVTNQGAYS QFWQDSGVTT 
IDFNNGVAPT TGFAKYSFEN GGSSSVRKDQ WAPAGPNGEV NDTSYLAVFN GDKVTINLDS
YLNYFGIDWG AISNNNTFSF YNGDTLIKSF TTQDVNTVAP ISAAQHGGER NGYLHFYAES
RNDLFNKIVI SQASTDGGGF ESDNHSFKIG NGRFKGFDPQ SVPEPGMTLG MLAVGGLFLR
QHKKQKLQSA SKS