Gene Ava_3376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAva_3376 
Symbol 
ID3680076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAnabaena variabilis ATCC 29413 
KingdomBacteria 
Replicon accessionNC_007413 
Strand
Start bp4199021 
End bp4200019 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content39% 
IMG OID637718726 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_323878 
Protein GI75909582 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATAT CAAAGATTAA TATTTCGGAA CGTCTTGACC ATGTTTATGA TGCAATTATT 
GTTGGTGGTG GTGCTGGTGG TTTATCTGCT GGAATCTACT TACAAAGATA CCGTCTTTCT
AGCCTAATTA TTGATAAAGG TAAGGCTCGT TCTTTCTGGA TGCAGGAATT ACATAACTAT
CTAGGATTGC CTCCAGACAC TCCCGGTCGT GTGTTGCTAC AACAAGGGAA AAAACATTAT
GAATCATTGG CTGGAGATTT TTTAACTGCT TACGTTGAAG AGGTTGTGGA CGAAGGTGAT
ACTTTTGCTG TGCGAGTGAA AGTTGGTCGT CAAAATAGTA CTTACTTTGT GTTGCATTCT
AAGTATTTGA TTGCGGCTAG TGGCATTATT GACCATCTAC CATCTTTAGA AAATATGCAG
AATGTTTTTG AATACGCTGG CTATAATTTG CACGTTTGTA TGGTTTGTGA CGGTTATGAA
ATGATAGATA AACAGTGCGG CTTTTTTGCA GGTAGTGAAG CTAGTATTGA GGAAATGGTG
TTTAATCTGA GTTGGTTTAC ACCTTACATT ACTATCTTTA CTCATGGATT GTTTACTGTA
AGTACAGAAT TGCGTTCTAA ATTACAGCAG TATGGTTATC GCTTAGTGGA AACACCAATT
AAGCGGTTTT TAGGTCAGAA TCATCATATG TCAGGTGTGG AATTGGTAGA TGGTACGGTA
GTTGAGTTAG AAACTGGTTT AATCTCAATG GGTTCTCGCT ATCACAATAC CTATTTGCAA
AGAATCGACT TAGAGTTAAA AGGGGGTAAT CTCGTCACAG ATAAGATGTG TCGCACCTCC
CACCCACGTA TTTTTGCCAT TGGTGATCTG AAAGTTGGTT TAAATCAAGT CGTGATTGCT
GCTGGCGATG GTGCTTTAGC TGCTACACAG ATTTGGCGTG ATATCCGTCG TTCCTTTGGT
GTACGTTGCT GGCAAGAGAA TCTGATATCA AATATTTAG
 
Protein sequence
MQISKINISE RLDHVYDAII VGGGAGGLSA GIYLQRYRLS SLIIDKGKAR SFWMQELHNY 
LGLPPDTPGR VLLQQGKKHY ESLAGDFLTA YVEEVVDEGD TFAVRVKVGR QNSTYFVLHS
KYLIAASGII DHLPSLENMQ NVFEYAGYNL HVCMVCDGYE MIDKQCGFFA GSEASIEEMV
FNLSWFTPYI TIFTHGLFTV STELRSKLQQ YGYRLVETPI KRFLGQNHHM SGVELVDGTV
VELETGLISM GSRYHNTYLQ RIDLELKGGN LVTDKMCRTS HPRIFAIGDL KVGLNQVVIA
AGDGALAATQ IWRDIRRSFG VRCWQENLIS NI